Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 SMUG1P1-201ENST00000590640 811 ntBASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
RIMS3Q9UJD0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 UNC93B3-201ENST00000308076 687 ntBASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 MIR4767-201ENST00000582827 78 ntBASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RIMS3Q9UJD0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RIMS3Q9UJD0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 AC133561.4-201ENST00000566112 224 ntBASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RIMS3Q9UJD0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.38■□□□□ 0.69
RIMS3Q9UJD0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 AC233992.3-201ENST00000607491 485 ntBASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIMS3Q9UJD0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms