Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 BX664725.1-201ENST00000438252 379 ntBASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 AC241377.3-202ENST00000626088 1088 ntBASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 AC241585.3-202ENST00000628937 1088 ntBASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 AC245100.8-202ENST00000629247 1058 ntBASIC18.02■□□□□ 0.48
COMMD3Q9UBI1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
COMMD3Q9UBI1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
COMMD3Q9UBI1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
COMMD3Q9UBI1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.02■□□□□ 0.47
COMMD3Q9UBI1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 AP006587.3-201ENST00000525742 1516 ntBASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COMMD3Q9UBI1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 MTDHP2-201ENST00000601468 714 ntBASIC18■□□□□ 0.47
COMMD3Q9UBI1 AL031848.2-201ENST00000607670 837 ntBASIC18■□□□□ 0.47
COMMD3Q9UBI1 AC092028.1-203ENST00000608262 953 ntBASIC18■□□□□ 0.47
COMMD3Q9UBI1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COMMD3Q9UBI1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COMMD3Q9UBI1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 TSPY13P-201ENST00000338964 914 ntBASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COMMD3Q9UBI1 AC125437.2-201ENST00000625180 2167 ntBASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 AC006455.2-201ENST00000429931 906 ntBASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COMMD3Q9UBI1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms