Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLE3Q9NRF9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
POLE3Q9NRF9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 AC091799.1-201ENST00000422823 811 ntBASIC19.01■□□□□ 0.63
POLE3Q9NRF9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 MYCNOS-205ENST00000641950 531 ntBASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.01■□□□□ 0.63
POLE3Q9NRF9 AP005212.1-201ENST00000581547 1997 ntBASIC19.01■□□□□ 0.63
POLE3Q9NRF9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19■□□□□ 0.63
POLE3Q9NRF9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 SAPCD2P1-201ENST00000395413 1184 ntBASIC19■□□□□ 0.63
POLE3Q9NRF9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLE3Q9NRF9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
POLE3Q9NRF9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
POLE3Q9NRF9 UBE2DNL-204ENST00000602536 740 ntBASIC19■□□□□ 0.63
POLE3Q9NRF9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
POLE3Q9NRF9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
POLE3Q9NRF9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19■□□□□ 0.63
POLE3Q9NRF9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLE3Q9NRF9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19■□□□□ 0.63
POLE3Q9NRF9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 AC007322.3-201ENST00000426526 701 ntBASIC18.99■□□□□ 0.63
POLE3Q9NRF9 KRT18P11-201ENST00000435214 1283 ntBASIC18.99■□□□□ 0.63
POLE3Q9NRF9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 AC087623.3-201ENST00000607047 1098 ntBASIC18.99■□□□□ 0.63
POLE3Q9NRF9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLE3Q9NRF9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLE3Q9NRF9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms