Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 AC100791.3-201ENST00000617619 330 ntBASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP13A1Q9HD20 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP13A1Q9HD20 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 MIPEPP3-201ENST00000412105 444 ntBASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP13A1Q9HD20 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 MCRIP2P1-201ENST00000394346 511 ntBASIC21■□□□□ 0.95
ATP13A1Q9HD20 BX276092.2-201ENST00000417668 665 ntBASIC21■□□□□ 0.95
ATP13A1Q9HD20 AL355472.2-201ENST00000422958 438 ntBASIC21■□□□□ 0.95
ATP13A1Q9HD20 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 AL138781.1-201ENST00000566567 1274 ntBASIC21■□□□□ 0.95
ATP13A1Q9HD20 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ATP13A1Q9HD20 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
ATP13A1Q9HD20 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 CYP21A1P-202ENST00000354927 1481 ntBASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP13A1Q9HD20 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 AC142086.2-201ENST00000569753 217 ntBASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 CYP2T3P-201ENST00000601990 817 ntBASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A1Q9HD20 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP13A1Q9HD20 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms