Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 AC024257.2-201ENST00000549699 147 ntBASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC42EP4Q9H3Q1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 AL136116.3-201ENST00000402907 1138 ntBASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 AC125437.2-201ENST00000625180 2167 ntBASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC42EP4Q9H3Q1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 TSPY26P-201ENST00000476365 1326 ntBASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 AC116562.4-201ENST00000641316 2276 ntBASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDC42EP4Q9H3Q1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC42EP4Q9H3Q1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 AL136162.1-201ENST00000607711 1078 ntBASIC20.83■□□□□ 0.93
CDC42EP4Q9H3Q1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.83■□□□□ 0.92
CDC42EP4Q9H3Q1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDC42EP4Q9H3Q1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms