Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 KRASP1-201ENST00000407852 552 ntBASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDH11XQ9BZA7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 AP001412.1-201ENST00000608405 714 ntBASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDH11XQ9BZA7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDH11XQ9BZA7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 AL390719.1-204ENST00000412397 1219 ntBASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDH11XQ9BZA7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 AC242852.2-201ENST00000615738 1807 ntBASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 MIR4785-201ENST00000585005 73 ntBASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 AC113410.3-201ENST00000623366 203 ntBASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDH11XQ9BZA7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 RARRES2P10-201ENST00000564312 460 ntBASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDH11XQ9BZA7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.78■■□□□ 1.88
PCDH11XQ9BZA7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms