Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.18■□□□□ 0.34
CCL13Q99616 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCL13Q99616 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCL13Q99616 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.17■□□□□ 0.34
CCL13Q99616 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CCL13Q99616 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.17■□□□□ 0.34
CCL13Q99616 RARRES2P4-201ENST00000514074 484 ntBASIC17.17■□□□□ 0.34
CCL13Q99616 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.17■□□□□ 0.34
CCL13Q99616 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCL13Q99616 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.17■□□□□ 0.34
CCL13Q99616 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CCL13Q99616 AC006128.1-201ENST00000624704 1661 ntBASIC17.16■□□□□ 0.34
CCL13Q99616 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCL13Q99616 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL13Q99616 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL13Q99616 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCL13Q99616 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
CCL13Q99616 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.16■□□□□ 0.34
CCL13Q99616 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL13Q99616 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL13Q99616 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.16■□□□□ 0.34
CCL13Q99616 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCL13Q99616 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.16■□□□□ 0.34
CCL13Q99616 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCL13Q99616 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL13Q99616 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL13Q99616 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL13Q99616 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL13Q99616 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 AC105036.2-201ENST00000569468 176 ntBASIC17.15■□□□□ 0.34
CCL13Q99616 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL13Q99616 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.15■□□□□ 0.34
CCL13Q99616 OR10C1-204ENST00000622521 1039 ntBASIC17.15■□□□□ 0.34
CCL13Q99616 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCL13Q99616 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL13Q99616 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCL13Q99616 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL13Q99616 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.15■□□□□ 0.34
CCL13Q99616 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.15■□□□□ 0.34
CCL13Q99616 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCL13Q99616 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCL13Q99616 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCL13Q99616 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCL13Q99616 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCL13Q99616 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL13Q99616 AC093787.1-201ENST00000450396 207 ntBASIC17.14■□□□□ 0.33
CCL13Q99616 AF201337.1-201ENST00000520239 748 ntBASIC17.14■□□□□ 0.33
CCL13Q99616 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.14■□□□□ 0.33
CCL13Q99616 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL13Q99616 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.14■□□□□ 0.33
CCL13Q99616 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCL13Q99616 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.14■□□□□ 0.33
CCL13Q99616 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms