Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.66■□□□□ 0.58
SPENQ96T58 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.66■□□□□ 0.58
SPENQ96T58 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.66■□□□□ 0.58
SPENQ96T58 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SPENQ96T58 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.66■□□□□ 0.58
SPENQ96T58 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.66■□□□□ 0.58
SPENQ96T58 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SPENQ96T58 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SPENQ96T58 AC087633.2-202ENST00000565166 1439 ntBASIC18.66■□□□□ 0.58
SPENQ96T58 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPENQ96T58 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SPENQ96T58 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 TMPOP1-202ENST00000424642 1267 ntBASIC18.65■□□□□ 0.58
SPENQ96T58 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.65■□□□□ 0.58
SPENQ96T58 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SPENQ96T58 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.65■□□□□ 0.58
SPENQ96T58 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.65■□□□□ 0.58
SPENQ96T58 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.65■□□□□ 0.58
SPENQ96T58 AC116050.2-201ENST00000612102 1779 ntBASIC18.65■□□□□ 0.58
SPENQ96T58 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SPENQ96T58 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
SPENQ96T58 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.65■□□□□ 0.58
SPENQ96T58 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 MCRIP2P1-201ENST00000394346 511 ntBASIC18.65■□□□□ 0.58
SPENQ96T58 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.65■□□□□ 0.58
SPENQ96T58 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.65■□□□□ 0.58
SPENQ96T58 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPENQ96T58 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPENQ96T58 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.65■□□□□ 0.58
SPENQ96T58 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPENQ96T58 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SPENQ96T58 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
SPENQ96T58 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.64■□□□□ 0.57
SPENQ96T58 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPENQ96T58 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.63■□□□□ 0.57
SPENQ96T58 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 AC133681.1-201ENST00000465482 601 ntBASIC18.63■□□□□ 0.57
SPENQ96T58 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.63■□□□□ 0.57
SPENQ96T58 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPENQ96T58 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.63■□□□□ 0.57
SPENQ96T58 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SPENQ96T58 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.62■□□□□ 0.57
SPENQ96T58 AP003071.4-201ENST00000562276 1284 ntBASIC18.62■□□□□ 0.57
SPENQ96T58 AC005829.2-201ENST00000571422 1056 ntBASIC18.62■□□□□ 0.57
SPENQ96T58 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SPENQ96T58 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPENQ96T58 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPENQ96T58 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SPENQ96T58 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SPENQ96T58 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPENQ96T58 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms