Protein–RNA interactions for Protein: Q96MN9

ZNF488, Zinc finger protein 488, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488Q96MN9 LINC01521-201ENST00000504184 1943 ntBASIC17.43■□□□□ 0.38
ZNF488Q96MN9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZNF488Q96MN9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ZNF488Q96MN9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF488Q96MN9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF488Q96MN9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF488Q96MN9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AP005212.1-201ENST00000581547 1997 ntBASIC17.41■□□□□ 0.38
ZNF488Q96MN9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AC137761.2-201ENST00000561729 223 ntBASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AC145350.3-201ENST00000569033 163 ntBASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 AL121603.2-201ENST00000557373 2117 ntBASIC17.41■□□□□ 0.38
ZNF488Q96MN9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF488Q96MN9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 AC116050.2-201ENST00000612102 1779 ntBASIC17.4■□□□□ 0.38
ZNF488Q96MN9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 AC091799.1-201ENST00000422823 811 ntBASIC17.4■□□□□ 0.38
ZNF488Q96MN9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 SLC7A5P1-201ENST00000568957 537 ntBASIC17.4■□□□□ 0.38
ZNF488Q96MN9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.4■□□□□ 0.38
ZNF488Q96MN9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
ZNF488Q96MN9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF488Q96MN9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF488Q96MN9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms