Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 CNN2P6-201ENST00000439038 900 ntBASIC16.48■□□□□ 0.23
RITA1Q96K30 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.48■□□□□ 0.23
RITA1Q96K30 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.48■□□□□ 0.23
RITA1Q96K30 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.48■□□□□ 0.23
RITA1Q96K30 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
RITA1Q96K30 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.48■□□□□ 0.23
RITA1Q96K30 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RITA1Q96K30 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RITA1Q96K30 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RITA1Q96K30 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RITA1Q96K30 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.47■□□□□ 0.23
RITA1Q96K30 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RITA1Q96K30 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RITA1Q96K30 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 AC007322.3-201ENST00000426526 701 ntBASIC16.47■□□□□ 0.23
RITA1Q96K30 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.47■□□□□ 0.23
RITA1Q96K30 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.47■□□□□ 0.23
RITA1Q96K30 BID-214ENST00000617586 542 ntTSL 5 BASIC16.47■□□□□ 0.23
RITA1Q96K30 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.47■□□□□ 0.23
RITA1Q96K30 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RITA1Q96K30 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.47■□□□□ 0.23
RITA1Q96K30 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.46■□□□□ 0.23
RITA1Q96K30 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.46■□□□□ 0.23
RITA1Q96K30 AP005212.1-201ENST00000581547 1997 ntBASIC16.46■□□□□ 0.23
RITA1Q96K30 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.46■□□□□ 0.23
RITA1Q96K30 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RITA1Q96K30 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.46■□□□□ 0.23
RITA1Q96K30 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 AC004911.1-201ENST00000416316 871 ntBASIC16.46■□□□□ 0.23
RITA1Q96K30 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.46■□□□□ 0.23
RITA1Q96K30 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.46■□□□□ 0.23
RITA1Q96K30 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.46■□□□□ 0.23
RITA1Q96K30 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 AC016405.3-201ENST00000607710 860 ntBASIC16.46■□□□□ 0.23
RITA1Q96K30 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.46■□□□□ 0.23
RITA1Q96K30 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RITA1Q96K30 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.46■□□□□ 0.22
RITA1Q96K30 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
RITA1Q96K30 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.45■□□□□ 0.22
RITA1Q96K30 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.45■□□□□ 0.22
RITA1Q96K30 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.45■□□□□ 0.22
RITA1Q96K30 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 AL591742.1-201ENST00000604433 565 ntBASIC16.45■□□□□ 0.22
RITA1Q96K30 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.45■□□□□ 0.22
RITA1Q96K30 AC013268.1-206ENST00000638368 961 ntBASIC16.45■□□□□ 0.22
RITA1Q96K30 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.45■□□□□ 0.22
RITA1Q96K30 AC112229.1-201ENST00000639295 961 ntBASIC16.45■□□□□ 0.22
RITA1Q96K30 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 AC073130.3-201ENST00000624389 2278 ntBASIC16.45■□□□□ 0.22
RITA1Q96K30 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RITA1Q96K30 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RITA1Q96K30 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RITA1Q96K30 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.44■□□□□ 0.22
RITA1Q96K30 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RITA1Q96K30 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
RITA1Q96K30 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RITA1Q96K30 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RITA1Q96K30 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms