Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMD4Q96H15 EP400NL-214ENST00000641289 2402 ntBASIC17.23■□□□□ 0.35
TIMD4Q96H15 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 CYP21A1P-202ENST00000354927 1481 ntBASIC17.23■□□□□ 0.35
TIMD4Q96H15 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TIMD4Q96H15 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TIMD4Q96H15 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 Z98882.1-201ENST00000622160 2253 ntBASIC17.22■□□□□ 0.35
TIMD4Q96H15 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.22■□□□□ 0.35
TIMD4Q96H15 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIMD4Q96H15 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.22■□□□□ 0.35
TIMD4Q96H15 KRT17P1-201ENST00000399211 1546 ntBASIC17.21■□□□□ 0.35
TIMD4Q96H15 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.21■□□□□ 0.35
TIMD4Q96H15 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 MYC-209ENST00000641252 345 ntBASIC17.21■□□□□ 0.35
TIMD4Q96H15 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TIMD4Q96H15 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TIMD4Q96H15 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TIMD4Q96H15 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.21■□□□□ 0.34
TIMD4Q96H15 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.21■□□□□ 0.34
TIMD4Q96H15 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.21■□□□□ 0.34
TIMD4Q96H15 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TIMD4Q96H15 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMD4Q96H15 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TIMD4Q96H15 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIMD4Q96H15 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMD4Q96H15 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.2■□□□□ 0.34
TIMD4Q96H15 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms