Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMP6Q96FZ7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 AC010141.3-201ENST00000456659 717 ntBASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHMP6Q96FZ7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMP6Q96FZ7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP6Q96FZ7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHMP6Q96FZ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.58■□□□□ 0.89
CHMP6Q96FZ7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHMP6Q96FZ7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 MIR3621-201ENST00000580529 85 ntBASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHMP6Q96FZ7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 AC241377.3-202ENST00000626088 1088 ntBASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 AC241585.3-202ENST00000628937 1088 ntBASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 AC245100.8-202ENST00000629247 1058 ntBASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHMP6Q96FZ7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms