Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
USP6NLQ92738 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
USP6NLQ92738 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP6NLQ92738 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
USP6NLQ92738 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.36■■□□□ 1.33
USP6NLQ92738 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC239809.2-201ENST00000415381 517 ntBASIC23.36■■□□□ 1.33
USP6NLQ92738 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.36■■□□□ 1.33
USP6NLQ92738 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP6NLQ92738 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.36■■□□□ 1.33
USP6NLQ92738 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.36■■□□□ 1.33
USP6NLQ92738 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.36■■□□□ 1.33
USP6NLQ92738 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.36■■□□□ 1.33
USP6NLQ92738 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
USP6NLQ92738 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP6NLQ92738 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.35■■□□□ 1.33
USP6NLQ92738 AL135905.2-201ENST00000584934 1404 ntBASIC23.35■■□□□ 1.33
USP6NLQ92738 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6NLQ92738 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.35■■□□□ 1.33
USP6NLQ92738 AC087499.1-201ENST00000418141 1075 ntBASIC23.35■■□□□ 1.33
USP6NLQ92738 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.35■■□□□ 1.33
USP6NLQ92738 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6NLQ92738 AC097493.4-201ENST00000641197 219 ntBASIC23.35■■□□□ 1.33
USP6NLQ92738 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6NLQ92738 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USP6NLQ92738 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.35■■□□□ 1.33
USP6NLQ92738 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
USP6NLQ92738 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP6NLQ92738 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
USP6NLQ92738 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6NLQ92738 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6NLQ92738 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6NLQ92738 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
USP6NLQ92738 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6NLQ92738 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.34■■□□□ 1.33
USP6NLQ92738 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.34■■□□□ 1.33
USP6NLQ92738 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6NLQ92738 MIR4785-201ENST00000585005 73 ntBASIC23.34■■□□□ 1.33
USP6NLQ92738 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
USP6NLQ92738 AC006557.6-201ENST00000623071 864 ntBASIC23.34■■□□□ 1.33
USP6NLQ92738 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.34■■□□□ 1.33
USP6NLQ92738 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
USP6NLQ92738 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.33■■□□□ 1.33
USP6NLQ92738 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.33■■□□□ 1.33
USP6NLQ92738 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
USP6NLQ92738 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.33■■□□□ 1.33
USP6NLQ92738 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 KRASP1-201ENST00000407852 552 ntBASIC23.33■■□□□ 1.33
USP6NLQ92738 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.33■■□□□ 1.33
USP6NLQ92738 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 RARRES2P10-201ENST00000564312 460 ntBASIC23.33■■□□□ 1.33
USP6NLQ92738 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
USP6NLQ92738 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.33■■□□□ 1.33
USP6NLQ92738 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.33■■□□□ 1.33
USP6NLQ92738 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
USP6NLQ92738 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6NLQ92738 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
USP6NLQ92738 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms