Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT9Q92600 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.88■□□□□ 0.61
CNOT9Q92600 AC091799.1-201ENST00000422823 811 ntBASIC18.88■□□□□ 0.61
CNOT9Q92600 KRT18P5-201ENST00000436075 1291 ntBASIC18.88■□□□□ 0.61
CNOT9Q92600 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 AC243732.1-201ENST00000612648 864 ntBASIC18.88■□□□□ 0.61
CNOT9Q92600 MYCNOS-205ENST00000641950 531 ntBASIC18.88■□□□□ 0.61
CNOT9Q92600 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT9Q92600 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
CNOT9Q92600 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 AC116050.2-201ENST00000612102 1779 ntBASIC18.88■□□□□ 0.61
CNOT9Q92600 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.88■□□□□ 0.61
CNOT9Q92600 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNOT9Q92600 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT9Q92600 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CNOT9Q92600 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.87■□□□□ 0.61
CNOT9Q92600 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT9Q92600 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.87■□□□□ 0.61
CNOT9Q92600 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.87■□□□□ 0.61
CNOT9Q92600 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT9Q92600 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.87■□□□□ 0.61
CNOT9Q92600 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT9Q92600 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNOT9Q92600 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.87■□□□□ 0.61
CNOT9Q92600 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.87■□□□□ 0.61
CNOT9Q92600 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
CNOT9Q92600 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.87■□□□□ 0.61
CNOT9Q92600 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CNOT9Q92600 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.86■□□□□ 0.61
CNOT9Q92600 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNOT9Q92600 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 GABARAPL3-202ENST00000624044 1851 ntBASIC18.86■□□□□ 0.61
CNOT9Q92600 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNOT9Q92600 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CNOT9Q92600 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CNOT9Q92600 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CNOT9Q92600 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT9Q92600 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT9Q92600 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT9Q92600 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT9Q92600 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CNOT9Q92600 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT9Q92600 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT9Q92600 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT9Q92600 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms