Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 AL512408.1-201ENST00000569378 2000 ntBASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRUB1Q8WWH5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRUB1Q8WWH5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRUB1Q8WWH5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 AC005082.1-201ENST00000413042 2259 ntBASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRUB1Q8WWH5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 FP700111.2-201ENST00000619190 1892 ntBASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 SMUG1P1-201ENST00000590640 811 ntBASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 AC011298.3-201ENST00000615796 283 ntBASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 SYT6-210ENST00000641643 1587 ntBASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRUB1Q8WWH5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 SLC47A1P1-202ENST00000449666 945 ntBASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 RARRES2P1-201ENST00000474487 481 ntBASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 AC009237.3-201ENST00000393279 1427 ntBASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRUB1Q8WWH5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 AC099778.1-201ENST00000568593 1911 ntBASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 SERBP1P1-201ENST00000396021 1160 ntBASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 AC112907.3-201ENST00000577781 2400 ntBASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRUB1Q8WWH5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRUB1Q8WWH5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms