Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
RNF139Q8WU17 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 AC010980.2-201ENST00000587099 1412 ntBASIC21.52■■□□□ 1.04
RNF139Q8WU17 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF139Q8WU17 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RNF139Q8WU17 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF139Q8WU17 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.51■■□□□ 1.03
RNF139Q8WU17 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF139Q8WU17 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
RNF139Q8WU17 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF139Q8WU17 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 AC100791.3-201ENST00000617619 330 ntBASIC21.5■■□□□ 1.03
RNF139Q8WU17 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF139Q8WU17 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RNF139Q8WU17 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 AC011484.1-201ENST00000377652 1995 ntBASIC21.49■■□□□ 1.03
RNF139Q8WU17 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 MIPEPP3-201ENST00000412105 444 ntBASIC21.49■■□□□ 1.03
RNF139Q8WU17 BX276092.2-201ENST00000417668 665 ntBASIC21.49■■□□□ 1.03
RNF139Q8WU17 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RNF139Q8WU17 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF139Q8WU17 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 MCRIP2P1-201ENST00000394346 511 ntBASIC21.48■■□□□ 1.03
RNF139Q8WU17 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RNF139Q8WU17 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.48■■□□□ 1.03
RNF139Q8WU17 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF139Q8WU17 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.47■■□□□ 1.03
RNF139Q8WU17 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms