Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTL9Q8NET4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RTL9Q8NET4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTL9Q8NET4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTL9Q8NET4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RTL9Q8NET4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.38■■□□□ 1.65
RTL9Q8NET4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 AC233263.1-201ENST00000578059 224 ntBASIC25.37■■□□□ 1.65
RTL9Q8NET4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RTL9Q8NET4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RTL9Q8NET4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 AC011484.1-201ENST00000377652 1995 ntBASIC25.36■■□□□ 1.65
RTL9Q8NET4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTL9Q8NET4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTL9Q8NET4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RTL9Q8NET4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RTL9Q8NET4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RTL9Q8NET4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 POM121L13P-201ENST00000422362 380 ntBASIC25.35■■□□□ 1.65
RTL9Q8NET4 UBE2SP1-201ENST00000450587 669 ntBASIC25.35■■□□□ 1.65
RTL9Q8NET4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.35■■□□□ 1.65
RTL9Q8NET4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.35■■□□□ 1.65
RTL9Q8NET4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RTL9Q8NET4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.34■■□□□ 1.65
RTL9Q8NET4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 KRT17P3-201ENST00000420566 1262 ntBASIC25.34■■□□□ 1.65
RTL9Q8NET4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RTL9Q8NET4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.34■■□□□ 1.65
RTL9Q8NET4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.33■■□□□ 1.65
RTL9Q8NET4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.33■■□□□ 1.65
RTL9Q8NET4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC25.33■■□□□ 1.65
RTL9Q8NET4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC25.33■■□□□ 1.65
RTL9Q8NET4 RN7SL471P-201ENST00000580476 299 ntBASIC25.33■■□□□ 1.65
RTL9Q8NET4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.33■■□□□ 1.65
RTL9Q8NET4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RTL9Q8NET4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RTL9Q8NET4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
RTL9Q8NET4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
RTL9Q8NET4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms