Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC091874.3-201ENST00000512672 1195 ntBASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 AC083880.1-201ENST00000608266 535 ntBASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 AC105020.6-201ENST00000621523 1217 ntBASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF39Q8N4T4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 AL589743.5-201ENST00000616611 1050 ntBASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ARHGEF39Q8N4T4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 MIR2861-201ENST00000636310 90 ntBASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ARHGEF39Q8N4T4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ARHGEF39Q8N4T4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
ARHGEF39Q8N4T4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
ARHGEF39Q8N4T4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ARHGEF39Q8N4T4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 LSM12P1-201ENST00000411836 588 ntBASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ARHGEF39Q8N4T4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ARHGEF39Q8N4T4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ARHGEF39Q8N4T4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms