Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRTM1Q86UE6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRTM1Q86UE6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRTM1Q86UE6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRTM1Q86UE6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 UNC93B3-201ENST00000308076 687 ntBASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
LRRTM1Q86UE6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 AC125437.2-201ENST00000625180 2167 ntBASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 AC087289.5-201ENST00000586076 3175 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms