Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN4Q6PJG9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRFN4Q6PJG9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.41■□□□□ 0.54
LRFN4Q6PJG9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 KRT18P5-201ENST00000436075 1291 ntBASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRFN4Q6PJG9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 PLK5-205ENST00000642079 1969 ntBASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 RARRES2P11-201ENST00000635158 484 ntBASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRFN4Q6PJG9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRFN4Q6PJG9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 AC121338.2-201ENST00000622535 1744 ntBASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRFN4Q6PJG9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 MIR5787-201ENST00000611784 55 ntBASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRFN4Q6PJG9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms