Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 LINC02228-203ENST00000641970 1355 ntBASIC21.29■■□□□ 1
FOXR1Q6PIV2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.29■■□□□ 1
FOXR1Q6PIV2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
FOXR1Q6PIV2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
FOXR1Q6PIV2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 AL049796.1-201ENST00000565336 1766 ntBASIC21.28■■□□□ 1
FOXR1Q6PIV2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 ID1-201ENST00000376105 1233 ntBASIC21.28■■□□□ 1
FOXR1Q6PIV2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 NEFHP1-201ENST00000412845 2629 ntBASIC21.28■■□□□ 1
FOXR1Q6PIV2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.28■■□□□ 1
FOXR1Q6PIV2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXR1Q6PIV2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
FOXR1Q6PIV2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXR1Q6PIV2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXR1Q6PIV2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.27■□□□□ 0.99
FOXR1Q6PIV2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXR1Q6PIV2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
FOXR1Q6PIV2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
FOXR1Q6PIV2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.26■□□□□ 0.99
FOXR1Q6PIV2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 TNXA-203ENST00000507684 2038 ntBASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 AL499627.2-201ENST00000606283 725 ntBASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 AC105233.4-201ENST00000642045 216 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms