Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 AP005435.1-201ENST00000529293 1178 ntBASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 AC020907.5-201ENST00000624372 1936 ntBASIC19.59■□□□□ 0.73
PPP4R4Q6NUP7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.58■□□□□ 0.73
PPP4R4Q6NUP7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPP4R4Q6NUP7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 MIR6084-201ENST00000622012 110 ntBASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 SMG8-203ENST00000578922 2178 ntBASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.57■□□□□ 0.72
PPP4R4Q6NUP7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 AC068587.7-201ENST00000641602 218 ntBASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PPP4R4Q6NUP7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 AL162377.1-201ENST00000618844 1793 ntBASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 AC010141.3-201ENST00000456659 717 ntBASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 AC105233.4-201ENST00000642045 216 ntBASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPP4R4Q6NUP7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PPP4R4Q6NUP7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.54■□□□□ 0.72
PPP4R4Q6NUP7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R4Q6NUP7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPP4R4Q6NUP7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.54■□□□□ 0.72
PPP4R4Q6NUP7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms