Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LPCAT4Q643R3 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
LPCAT4Q643R3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT4Q643R3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT4Q643R3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT4Q643R3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.33■□□□□ 0.69
LPCAT4Q643R3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LPCAT4Q643R3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 AC068587.7-201ENST00000641602 218 ntBASIC19.33■□□□□ 0.68
LPCAT4Q643R3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LPCAT4Q643R3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LPCAT4Q643R3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.31■□□□□ 0.68
LPCAT4Q643R3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
LPCAT4Q643R3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 AC010141.3-201ENST00000456659 717 ntBASIC19.3■□□□□ 0.68
LPCAT4Q643R3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 AC007613.1-201ENST00000572811 2597 ntBASIC19.3■□□□□ 0.68
LPCAT4Q643R3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
LPCAT4Q643R3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms