Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.42■□□□□ 0.54
KRTCAP3Q53RY4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KRTCAP3Q53RY4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AL390719.1-204ENST00000412397 1219 ntBASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 MIR4497-201ENST00000583208 89 ntBASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 AL356652.1-201ENST00000615962 565 ntBASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
KRTCAP3Q53RY4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
KRTCAP3Q53RY4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
KRTCAP3Q53RY4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KRTCAP3Q53RY4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 AC005829.2-201ENST00000571422 1056 ntBASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 AC233263.1-201ENST00000578059 224 ntBASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 AC120498.8-201ENST00000614275 531 ntBASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 CLDN5-201ENST00000403084 2357 ntBASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KRTCAP3Q53RY4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KRTCAP3Q53RY4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms