Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
TRIM60Q495X7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.68■■□□□ 1.22
TRIM60Q495X7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM60Q495X7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM60Q495X7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 MMP23A-201ENST00000234610 1017 ntBASIC22.67■■□□□ 1.22
TRIM60Q495X7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.67■■□□□ 1.22
TRIM60Q495X7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.67■■□□□ 1.22
TRIM60Q495X7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.67■■□□□ 1.22
TRIM60Q495X7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TRIM60Q495X7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM60Q495X7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM60Q495X7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM60Q495X7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM60Q495X7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.66■■□□□ 1.22
TRIM60Q495X7 AL049597.2-201ENST00000565575 961 ntBASIC22.66■■□□□ 1.22
TRIM60Q495X7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRIM60Q495X7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 AL390719.1-204ENST00000412397 1219 ntBASIC22.65■■□□□ 1.22
TRIM60Q495X7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.65■■□□□ 1.22
TRIM60Q495X7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRIM60Q495X7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM60Q495X7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
TRIM60Q495X7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TRIM60Q495X7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.64■■□□□ 1.22
TRIM60Q495X7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.64■■□□□ 1.22
TRIM60Q495X7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
TRIM60Q495X7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 AL355355.2-201ENST00000442321 338 ntBASIC22.64■■□□□ 1.21
TRIM60Q495X7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 AL590326.2-201ENST00000625139 305 ntBASIC22.64■■□□□ 1.21
TRIM60Q495X7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TRIM60Q495X7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRIM60Q495X7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRIM60Q495X7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.63■■□□□ 1.21
TRIM60Q495X7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms