Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 RPS2P4-201ENST00000476944 856 ntBASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.09■■□□□ 1.45
SHROOM1Q2M3G4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 RPPH1-201ENST00000516869 333 ntBASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 C1QBPP2-201ENST00000528754 825 ntBASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 AC069544.1-201ENST00000609399 999 ntBASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SHROOM1Q2M3G4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.08■■□□□ 1.44
SHROOM1Q2M3G4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.07■■□□□ 1.44
SHROOM1Q2M3G4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SHROOM1Q2M3G4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 AC008550.1-201ENST00000511500 884 ntBASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 RN7SL471P-201ENST00000580476 299 ntBASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 AP006294.2-201ENST00000641667 209 ntBASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 MME-217ENST00000616757 1315 ntTSL 5 BASIC24.05■■□□□ 1.44
SHROOM1Q2M3G4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 Z98882.1-201ENST00000622160 2253 ntBASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHROOM1Q2M3G4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 AC244015.2-201ENST00000616358 1861 ntBASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.03■■□□□ 1.44
SHROOM1Q2M3G4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms