Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 KRT19P1-201ENST00000405746 1186 ntBASIC13.54□□□□□ -0.24
SYCNQ0VAF6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SYCNQ0VAF6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 AL121603.2-201ENST00000557373 2117 ntBASIC13.53□□□□□ -0.24
SYCNQ0VAF6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SYCNQ0VAF6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SYCNQ0VAF6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SYCNQ0VAF6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 SLC7A5P2-201ENST00000553010 536 ntBASIC13.52□□□□□ -0.25
SYCNQ0VAF6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 AC004854.2-201ENST00000608450 1441 ntBASIC13.52□□□□□ -0.25
SYCNQ0VAF6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 LINC01521-201ENST00000504184 1943 ntBASIC13.52□□□□□ -0.25
SYCNQ0VAF6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 RNF165-205ENST00000588679 2904 ntBASIC13.52□□□□□ -0.25
SYCNQ0VAF6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SYCNQ0VAF6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 FEM1AP1-201ENST00000431297 1995 ntBASIC13.51□□□□□ -0.25
SYCNQ0VAF6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 AC007225.1-201ENST00000566331 1836 ntBASIC13.51□□□□□ -0.25
SYCNQ0VAF6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 RARRES2P11-201ENST00000635158 484 ntBASIC13.51□□□□□ -0.25
SYCNQ0VAF6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SYCNQ0VAF6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SYCNQ0VAF6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SYCNQ0VAF6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.5□□□□□ -0.25
SYCNQ0VAF6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms