Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 YKL123WYKL123W 381 nt2.05□□□□□ -2.08
CLP1Q08685 VTI1YMR197C 654 nt2.05□□□□□ -2.08
CLP1Q08685 DYN3YMR299C 939 nt2.05□□□□□ -2.08
CLP1Q08685 YNL089CYNL089C 477 nt2.05□□□□□ -2.08
CLP1Q08685 snR191snR191 274 nt2.05□□□□□ -2.08
CLP1Q08685 YCL002CYCL002C 792 nt2.05□□□□□ -2.08
CLP1Q08685 REF2YDR195W 1602 nt2.05□□□□□ -2.08
CLP1Q08685 DFG16YOR030W 1860 nt2.05□□□□□ -2.08
CLP1Q08685 FUS2YMR232W 2034 nt2.05□□□□□ -2.08
CLP1Q08685 IRC4YDR540C 540 nt2.04□□□□□ -2.08
CLP1Q08685 TAD1YGL243W 1203 nt2.04□□□□□ -2.08
CLP1Q08685 MVB12YGR206W 306 nt2.04□□□□□ -2.08
CLP1Q08685 AIM18YHR198C 966 nt2.04□□□□□ -2.08
CLP1Q08685 YAP7YOL028C 738 nt2.04□□□□□ -2.08
CLP1Q08685 NOP12YOL041C 1380 nt2.04□□□□□ -2.08
CLP1Q08685 RUD3YOR216C 1455 nt2.03□□□□□ -2.08
CLP1Q08685 MGM1YOR211C 2646 nt2.03□□□□□ -2.08
CLP1Q08685 CFT2YLR115W 2580 nt2.03□□□□□ -2.08
CLP1Q08685 SRD1YCR018C 666 nt2.03□□□□□ -2.08
CLP1Q08685 CPR5YDR304C 678 nt2.03□□□□□ -2.08
CLP1Q08685 TIF35YDR429C 825 nt2.03□□□□□ -2.08
CLP1Q08685 RSM28YDR494W 1086 nt2.03□□□□□ -2.08
CLP1Q08685 YER189WYER189W 369 nt2.03□□□□□ -2.08
CLP1Q08685 YFR054CYFR054C 579 nt2.03□□□□□ -2.08
CLP1Q08685 YGR226CYGR226C 210 nt2.03□□□□□ -2.08
CLP1Q08685 ERG29YMR134W 714 nt2.03□□□□□ -2.08
CLP1Q08685 YNR025CYNR025C 360 nt2.03□□□□□ -2.08
CLP1Q08685 YOL159C-AYOL159C-A 273 nt2.03□□□□□ -2.08
CLP1Q08685 CUR1YPR158W 759 nt2.03□□□□□ -2.08
CLP1Q08685 ADF1YCL058W-A 342 nt2.03□□□□□ -2.08
CLP1Q08685 YDR262WYDR262W 819 nt2.02□□□□□ -2.09
CLP1Q08685 RSM18YER050C 417 nt2.02□□□□□ -2.09
CLP1Q08685 YER107W-AYER107W-A 321 nt2.02□□□□□ -2.09
CLP1Q08685 HRI1YLR301W 735 nt2.02□□□□□ -2.09
CLP1Q08685 ARC18YLR370C 537 nt2.02□□□□□ -2.09
CLP1Q08685 DGR1YNL130C-A 147 nt2.02□□□□□ -2.09
CLP1Q08685 YPL119C-AYPL119C-A 264 nt2.02□□□□□ -2.09
CLP1Q08685 ARR2YPR200C 393 nt2.02□□□□□ -2.09
CLP1Q08685 DIS3YOL021C 3006 nt2.01□□□□□ -2.09
CLP1Q08685 ADR1YDR216W 3972 nt2.01□□□□□ -2.09
CLP1Q08685 NCS2YNL119W 1482 nt2.01□□□□□ -2.09
CLP1Q08685 JJJ2YJL162C 1752 nt2.01□□□□□ -2.09
CLP1Q08685 YDL163WYDL163W 303 nt2.01□□□□□ -2.09
CLP1Q08685 SEC31YDL195W 3822 nt2.01□□□□□ -2.09
CLP1Q08685 YIP1YGR172C 747 nt2.01□□□□□ -2.09
CLP1Q08685 YHR050W-AYHR050W-A 171 nt2.01□□□□□ -2.09
CLP1Q08685 SDS22YKL193C 1017 nt2.01□□□□□ -2.09
CLP1Q08685 GIM5YML094W 492 nt2.01□□□□□ -2.09
CLP1Q08685 SIP18YMR175W 240 nt2.01□□□□□ -2.09
CLP1Q08685 SUS1YBR111W-A 291 nt2.01□□□□□ -2.09
CLP1Q08685 RNH70YGR276C 1662 nt2.01□□□□□ -2.09
CLP1Q08685 LHS1YKL073W 2646 nt2.01□□□□□ -2.09
CLP1Q08685 SPP41YDR464W 4308 nt2□□□□□ -2.09
CLP1Q08685 LST4YKL176C 2487 nt2□□□□□ -2.09
CLP1Q08685 SLK19YOR195W 2466 nt2□□□□□ -2.09
CLP1Q08685 YCR013CYCR013C 648 nt2□□□□□ -2.09
CLP1Q08685 KEI1YDR367W 666 nt2□□□□□ -2.09
CLP1Q08685 GPI19YDR437W 423 nt2□□□□□ -2.09
CLP1Q08685 SNO3YFL060C 669 nt2□□□□□ -2.09
CLP1Q08685 MND1YGL183C 660 nt2□□□□□ -2.09
CLP1Q08685 THG1YGR024C 714 nt2□□□□□ -2.09
CLP1Q08685 ATX1YNL259C 222 nt2□□□□□ -2.09
CLP1Q08685 SNO2YNL334C 669 nt2□□□□□ -2.09
CLP1Q08685 CSI2YOL007C 1026 nt2□□□□□ -2.09
CLP1Q08685 MET18YIL128W 3099 nt2□□□□□ -2.09
CLP1Q08685 BAS1YKR099W 2436 nt2□□□□□ -2.09
CLP1Q08685 VPS16YPL045W 2397 nt2□□□□□ -2.09
CLP1Q08685 LRE1YCL051W 1752 nt2□□□□□ -2.09
CLP1Q08685 VPH1YOR270C 2523 nt1.99□□□□□ -2.09
CLP1Q08685 PRP6YBR055C 2700 nt1.99□□□□□ -2.09
CLP1Q08685 GPI8YDR331W 1236 nt1.99□□□□□ -2.09
CLP1Q08685 YFL012W-AYFL012W-A 375 nt1.99□□□□□ -2.09
CLP1Q08685 RPL11BYGR085C 525 nt1.99□□□□□ -2.09
CLP1Q08685 YET1YKL065C 621 nt1.99□□□□□ -2.09
CLP1Q08685 MRP49YKL167C 414 nt1.99□□□□□ -2.09
CLP1Q08685 PAI3YMR174C 207 nt1.99□□□□□ -2.09
CLP1Q08685 MRPL40YPL173W 894 nt1.99□□□□□ -2.09
CLP1Q08685 RPL11AYPR102C 525 nt1.99□□□□□ -2.09
CLP1Q08685 YPR147CYPR147C 915 nt1.99□□□□□ -2.09
CLP1Q08685 SCH9YHR205W 2475 nt1.99□□□□□ -2.09
CLP1Q08685 YHR214C-BYHR214C-B 5382 nt1.98□□□□□ -2.09
CLP1Q08685 SNA4YDL123W 423 nt1.98□□□□□ -2.09
CLP1Q08685 NTF2YER009W 378 nt1.98□□□□□ -2.09
CLP1Q08685 YHR054CYHR054C 1065 nt1.98□□□□□ -2.09
CLP1Q08685 LCL2YLR104W 396 nt1.98□□□□□ -2.09
CLP1Q08685 ECI1YLR284C 843 nt1.98□□□□□ -2.09
CLP1Q08685 IRC21YMR073C 606 nt1.98□□□□□ -2.09
CLP1Q08685 ESF2YNR054C 951 nt1.98□□□□□ -2.09
CLP1Q08685 NTC20YBR188C 423 nt1.98□□□□□ -2.09
CLP1Q08685 USO1YDL058W 5373 nt1.98□□□□□ -2.09
CLP1Q08685 CAT2YML042W 2013 nt1.98□□□□□ -2.09
CLP1Q08685 HER1YOR227W 3741 nt1.97□□□□□ -2.09
CLP1Q08685 snR5snR5 204 nt1.97□□□□□ -2.09
CLP1Q08685 PBP4YDL053C 558 nt1.97□□□□□ -2.09
CLP1Q08685 tT(UGU)HtT(UGU)H 72 nt1.97□□□□□ -2.09
CLP1Q08685 YIL058WYIL058W 285 nt1.97□□□□□ -2.09
CLP1Q08685 YMR247W-AYMR247W-A 144 nt1.97□□□□□ -2.09
CLP1Q08685 YPR153WYPR153W 423 nt1.97□□□□□ -2.09
CLP1Q08685 YEL1YBL060W 2064 nt1.97□□□□□ -2.09
CLP1Q08685 YFL002W-BYFL002W-B 1317 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms