Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 RIO2YNL207W 1278 nt2.4□□□□□ -2.03
RPN9Q04062 YOR364WYOR364W 369 nt2.4□□□□□ -2.03
RPN9Q04062 KRE33YNL132W 3171 nt2.4□□□□□ -2.03
RPN9Q04062 BAS1YKR099W 2436 nt2.39□□□□□ -2.03
RPN9Q04062 YCR064CYCR064C 411 nt2.39□□□□□ -2.03
RPN9Q04062 BUD19YJL188C 309 nt2.39□□□□□ -2.03
RPN9Q04062 YAL026C-AYAL026C-A 438 nt2.39□□□□□ -2.03
RPN9Q04062 YLR271WYLR271W 825 nt2.39□□□□□ -2.03
RPN9Q04062 HRI1YLR301W 735 nt2.39□□□□□ -2.03
RPN9Q04062 YMR304C-AYMR304C-A 351 nt2.39□□□□□ -2.03
RPN9Q04062 RPL36BYPL249C-A 303 nt2.39□□□□□ -2.03
RPN9Q04062 STE11YLR362W 2154 nt2.39□□□□□ -2.03
RPN9Q04062 YDR199WYDR199W 366 nt2.38□□□□□ -2.03
RPN9Q04062 YDR250CYDR250C 276 nt2.38□□□□□ -2.03
RPN9Q04062 YER119C-AYER119C-A 372 nt2.38□□□□□ -2.03
RPN9Q04062 EMC4YGL231C 573 nt2.38□□□□□ -2.03
RPN9Q04062 NSL1YPL233W 651 nt2.38□□□□□ -2.03
RPN9Q04062 YBR209WYBR209W 318 nt2.38□□□□□ -2.03
RPN9Q04062 PHO91YNR013C 2685 nt2.38□□□□□ -2.03
RPN9Q04062 TMN3YER113C 2121 nt2.38□□□□□ -2.03
RPN9Q04062 YNL034WYNL034W 1839 nt2.38□□□□□ -2.03
RPN9Q04062 GDI1YER136W 1356 nt2.37□□□□□ -2.03
RPN9Q04062 SIR3YLR442C 2937 nt2.37□□□□□ -2.03
RPN9Q04062 LSM2YBL026W 288 nt2.37□□□□□ -2.03
RPN9Q04062 SWS2YNL081C 432 nt2.37□□□□□ -2.03
RPN9Q04062 ARF3YOR094W 552 nt2.37□□□□□ -2.03
RPN9Q04062 YPR145C-AYPR145C-A 237 nt2.37□□□□□ -2.03
RPN9Q04062 YDR210W-AYDR210W-A 1317 nt2.37□□□□□ -2.03
RPN9Q04062 HSC82YMR186W 2118 nt2.36□□□□□ -2.03
RPN9Q04062 YCR108CYCR108C 192 nt2.36□□□□□ -2.03
RPN9Q04062 ACB1YGR037C 264 nt2.36□□□□□ -2.03
RPN9Q04062 YMR320WYMR320W 306 nt2.36□□□□□ -2.03
RPN9Q04062 RPL25YOL127W 429 nt2.36□□□□□ -2.03
RPN9Q04062 LEU3YLR451W 2661 nt2.36□□□□□ -2.03
RPN9Q04062 ESL2YKR096W 3588 nt2.36□□□□□ -2.03
RPN9Q04062 ECM5YMR176W 4236 nt2.35□□□□□ -2.03
RPN9Q04062 CHZ1YER030W 462 nt2.35□□□□□ -2.03
RPN9Q04062 PSY1YKL076C 384 nt2.35□□□□□ -2.03
RPN9Q04062 YMR013C-AYMR013C-A 150 nt2.35□□□□□ -2.03
RPN9Q04062 TRM7YBR061C 933 nt2.35□□□□□ -2.03
RPN9Q04062 YPR096CYPR096C 303 nt2.35□□□□□ -2.03
RPN9Q04062 YPR172WYPR172W 603 nt2.35□□□□□ -2.03
RPN9Q04062 MSB1YOR188W 3414 nt2.35□□□□□ -2.03
RPN9Q04062 RRP12YPL012W 3687 nt2.35□□□□□ -2.03
RPN9Q04062 YJL181WYJL181W 1836 nt2.35□□□□□ -2.03
RPN9Q04062 SSF1YHR066W 1362 nt2.35□□□□□ -2.03
RPN9Q04062 ROY1YMR258C 1662 nt2.34□□□□□ -2.03
RPN9Q04062 PRP6YBR055C 2700 nt2.34□□□□□ -2.03
RPN9Q04062 YPR089WYPR089W 2667 nt2.34□□□□□ -2.03
RPN9Q04062 TWF1YGR080W 999 nt2.34□□□□□ -2.03
RPN9Q04062 YIR020CYIR020C 303 nt2.34□□□□□ -2.03
RPN9Q04062 PEX17YNL214W 600 nt2.34□□□□□ -2.03
RPN9Q04062 VTC3YPL019C 2508 nt2.34□□□□□ -2.04
RPN9Q04062 SSF2YDR312W 1362 nt2.34□□□□□ -2.04
RPN9Q04062 VPS41YDR080W 2979 nt2.34□□□□□ -2.04
RPN9Q04062 SVL3YPL032C 2478 nt2.33□□□□□ -2.04
RPN9Q04062 OSW7YFR039C 1533 nt2.33□□□□□ -2.04
RPN9Q04062 INP53YOR109W 3324 nt2.33□□□□□ -2.04
RPN9Q04062 SCD5YOR329C 2619 nt2.33□□□□□ -2.04
RPN9Q04062 PSO2YMR137C 1986 nt2.33□□□□□ -2.04
RPN9Q04062 YDL016CYDL016C 303 nt2.33□□□□□ -2.04
RPN9Q04062 snR84snR84 550 nt2.33□□□□□ -2.04
RPN9Q04062 PEA2YER149C 1263 nt2.33□□□□□ -2.04
RPN9Q04062 RAD6YGL058W 519 nt2.33□□□□□ -2.04
RPN9Q04062 Q0144Q0144 330 nt2.33□□□□□ -2.04
RPN9Q04062 YIL029CYIL029C 429 nt2.33□□□□□ -2.04
RPN9Q04062 BET4YJL031C 984 nt2.33□□□□□ -2.04
RPN9Q04062 RLP24YLR009W 600 nt2.33□□□□□ -2.04
RPN9Q04062 JID1YPR061C 906 nt2.33□□□□□ -2.04
RPN9Q04062 YBR197CYBR197C 654 nt2.33□□□□□ -2.04
RPN9Q04062 EDS1YBR033W 2760 nt2.33□□□□□ -2.04
RPN9Q04062 UBP15YMR304W 3693 nt2.32□□□□□ -2.04
RPN9Q04062 CBF2YGR140W 2871 nt2.32□□□□□ -2.04
RPN9Q04062 YCR081C-AYCR081C-A 237 nt2.32□□□□□ -2.04
RPN9Q04062 AHC2YCR082W 387 nt2.32□□□□□ -2.04
RPN9Q04062 YGL165CYGL165C 579 nt2.32□□□□□ -2.04
RPN9Q04062 BET3YKR068C 582 nt2.32□□□□□ -2.04
RPN9Q04062 ARV1YLR242C 966 nt2.32□□□□□ -2.04
RPN9Q04062 YLR252WYLR252W 306 nt2.32□□□□□ -2.04
RPN9Q04062 DAD3YBR233W-A 285 nt2.32□□□□□ -2.04
RPN9Q04062 TRS130YMR218C 3309 nt2.32□□□□□ -2.04
RPN9Q04062 BI4Q0120 1917 nt2.32□□□□□ -2.04
RPN9Q04062 RGL1YPL066W 1440 nt2.32□□□□□ -2.04
RPN9Q04062 TOF1YNL273W 3717 nt2.32□□□□□ -2.04
RPN9Q04062 SCP160YJL080C 3669 nt2.31□□□□□ -2.04
RPN9Q04062 TSA2YDR453C 591 nt2.31□□□□□ -2.04
RPN9Q04062 SDC1YDR469W 528 nt2.31□□□□□ -2.04
RPN9Q04062 YER038W-AYER038W-A 381 nt2.31□□□□□ -2.04
RPN9Q04062 RPL29YFR032C-A 180 nt2.31□□□□□ -2.04
RPN9Q04062 YGL015CYGL015C 393 nt2.31□□□□□ -2.04
RPN9Q04062 GET1YGL020C 708 nt2.31□□□□□ -2.04
RPN9Q04062 PRM8YGL053W 714 nt2.31□□□□□ -2.04
RPN9Q04062 SAS2YMR127C 1017 nt2.31□□□□□ -2.04
RPN9Q04062 RCN2YOR220W 798 nt2.31□□□□□ -2.04
RPN9Q04062 MEI5YPL121C 669 nt2.31□□□□□ -2.04
RPN9Q04062 YBR071WYBR071W 636 nt2.31□□□□□ -2.04
RPN9Q04062 KSP1YHR082C 3090 nt2.31□□□□□ -2.04
RPN9Q04062 SPF1YEL031W 3648 nt2.3□□□□□ -2.04
RPN9Q04062 YRB1YDR002W 606 nt2.3□□□□□ -2.04
RPN9Q04062 PET191YJR034W 327 nt2.3□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms