Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 MRP8YKL142W 660 nt3.95□□□□□ -1.78
UFD2P54860 PHO81YGR233C 3537 nt3.95□□□□□ -1.78
UFD2P54860 PDC2YDR081C 2778 nt3.95□□□□□ -1.78
UFD2P54860 COX1Q0045 1605 nt3.95□□□□□ -1.78
UFD2P54860 RSF2YJR127C 4143 nt3.94□□□□□ -1.78
UFD2P54860 XRN1YGL173C 4587 nt3.94□□□□□ -1.78
UFD2P54860 BNI4YNL233W 2679 nt3.94□□□□□ -1.78
UFD2P54860 YGR265WYGR265W 411 nt3.94□□□□□ -1.78
UFD2P54860 NMA111YNL123W 2994 nt3.94□□□□□ -1.78
UFD2P54860 ALA1YOR335C 2877 nt3.94□□□□□ -1.78
UFD2P54860 SHQ1YIL104C 1524 nt3.94□□□□□ -1.78
UFD2P54860 SEA4YBL104C 3117 nt3.94□□□□□ -1.78
UFD2P54860 BYE1YKL005C 1785 nt3.94□□□□□ -1.78
UFD2P54860 TAF1YGR274C 3201 nt3.93□□□□□ -1.78
UFD2P54860 TMA108YIL137C 2841 nt3.93□□□□□ -1.78
UFD2P54860 RPS13YDR064W 456 nt3.93□□□□□ -1.78
UFD2P54860 YDR169C-AYDR169C-A 150 nt3.93□□□□□ -1.78
UFD2P54860 YDR250CYDR250C 276 nt3.93□□□□□ -1.78
UFD2P54860 RPL30YGL030W 318 nt3.93□□□□□ -1.78
UFD2P54860 RPS8AYBL072C 603 nt3.93□□□□□ -1.78
UFD2P54860 PEX11YOL147C 711 nt3.93□□□□□ -1.78
UFD2P54860 MNT3YIL014W 1893 nt3.92□□□□□ -1.78
UFD2P54860 CYC7YEL039C 342 nt3.92□□□□□ -1.78
UFD2P54860 YER023C-AYER023C-A 213 nt3.92□□□□□ -1.78
UFD2P54860 BLI1YKL061W 342 nt3.92□□□□□ -1.78
UFD2P54860 PSY1YKL076C 384 nt3.92□□□□□ -1.78
UFD2P54860 YPR014CYPR014C 330 nt3.92□□□□□ -1.78
UFD2P54860 FAS1YKL182W 6156 nt3.92□□□□□ -1.78
UFD2P54860 CHS3YBR023C 3498 nt3.92□□□□□ -1.78
UFD2P54860 CDH1YGL003C 1701 nt3.92□□□□□ -1.78
UFD2P54860 PCF11YDR228C 1881 nt3.92□□□□□ -1.78
UFD2P54860 PWP2YCR057C 2772 nt3.91□□□□□ -1.78
UFD2P54860 RPL26AYLR344W 384 nt3.91□□□□□ -1.78
UFD2P54860 YOL019W-AYOL019W-A 153 nt3.91□□□□□ -1.78
UFD2P54860 YBR085C-AYBR085C-A 258 nt3.91□□□□□ -1.78
UFD2P54860 SSY1YDR160W 2559 nt3.91□□□□□ -1.78
UFD2P54860 AKR1YDR264C 2295 nt3.91□□□□□ -1.78
UFD2P54860 OSH3YHR073W 2991 nt3.9□□□□□ -1.78
UFD2P54860 YAR070CYAR070C 300 nt3.9□□□□□ -1.79
UFD2P54860 YMR122W-AYMR122W-A 255 nt3.9□□□□□ -1.79
UFD2P54860 BIT61YJL058C 1632 nt3.9□□□□□ -1.79
UFD2P54860 GPI10YGL142C 1851 nt3.9□□□□□ -1.79
UFD2P54860 MSR1YHR091C 1932 nt3.89□□□□□ -1.79
UFD2P54860 TPS2YDR074W 2691 nt3.89□□□□□ -1.79
UFD2P54860 SEC15YGL233W 2733 nt3.89□□□□□ -1.79
UFD2P54860 YHL006W-AYHL006W-A 354 nt3.89□□□□□ -1.79
UFD2P54860 YLR294CYLR294C 330 nt3.89□□□□□ -1.79
UFD2P54860 snR191snR191 274 nt3.89□□□□□ -1.79
UFD2P54860 SPT16YGL207W 3108 nt3.89□□□□□ -1.79
UFD2P54860 VBA4YDR119W 2307 nt3.89□□□□□ -1.79
UFD2P54860 GLC3YEL011W 2115 nt3.89□□□□□ -1.79
UFD2P54860 IOC2YLR095C 2439 nt3.89□□□□□ -1.79
UFD2P54860 LSM1YJL124C 519 nt3.88□□□□□ -1.79
UFD2P54860 TIM12YBR091C 330 nt3.88□□□□□ -1.79
UFD2P54860 snR51snR51 107 nt3.88□□□□□ -1.79
UFD2P54860 YPR003CYPR003C 2265 nt3.88□□□□□ -1.79
UFD2P54860 LYS9YNR050C 1341 nt3.88□□□□□ -1.79
UFD2P54860 IOC3YFR013W 2364 nt3.88□□□□□ -1.79
UFD2P54860 RKM1YPL208W 1752 nt3.87□□□□□ -1.79
UFD2P54860 HYR1YIR037W 492 nt3.87□□□□□ -1.79
UFD2P54860 NCE101YJL205C 162 nt3.87□□□□□ -1.79
UFD2P54860 COX7YMR256C 183 nt3.87□□□□□ -1.79
UFD2P54860 YPR099CYPR099C 357 nt3.87□□□□□ -1.79
UFD2P54860 YJL016WYJL016W 1686 nt3.87□□□□□ -1.79
UFD2P54860 IRC10YOL015W 1761 nt3.86□□□□□ -1.79
UFD2P54860 YNL034WYNL034W 1839 nt3.86□□□□□ -1.79
UFD2P54860 RAD26YJR035W 3258 nt3.86□□□□□ -1.79
UFD2P54860 TFB1YDR311W 1929 nt3.86□□□□□ -1.79
UFD2P54860 YDL011CYDL011C 324 nt3.86□□□□□ -1.79
UFD2P54860 snR80snR80 171 nt3.86□□□□□ -1.79
UFD2P54860 YDR193WYDR193W 399 nt3.86□□□□□ -1.79
UFD2P54860 TMA22YJR014W 597 nt3.86□□□□□ -1.79
UFD2P54860 XRS2YDR369C 2565 nt3.85□□□□□ -1.79
UFD2P54860 YGL188C-AYGL188C-A 141 nt3.85□□□□□ -1.79
UFD2P54860 YIL058WYIL058W 285 nt3.85□□□□□ -1.79
UFD2P54860 TMA10YLR327C 261 nt3.85□□□□□ -1.79
UFD2P54860 YMR046W-AYMR046W-A 129 nt3.85□□□□□ -1.79
UFD2P54860 ATP15YPL271W 189 nt3.85□□□□□ -1.79
UFD2P54860 YPR108W-AYPR108W-A 213 nt3.85□□□□□ -1.79
UFD2P54860 SWI1YPL016W 3945 nt3.85□□□□□ -1.79
UFD2P54860 MDN1YLR106C 14733 nt3.85□□□□□ -1.79
UFD2P54860 RPA135YPR010C 3612 nt3.84□□□□□ -1.79
UFD2P54860 WIP1YDR374W-A 270 nt3.84□□□□□ -1.79
UFD2P54860 YER079C-AYER079C-A 339 nt3.84□□□□□ -1.79
UFD2P54860 RPS7AYOR096W 573 nt3.84□□□□□ -1.79
UFD2P54860 YPR077CYPR077C 372 nt3.84□□□□□ -1.79
UFD2P54860 REG1YDR028C 3045 nt3.84□□□□□ -1.79
UFD2P54860 DAN4YJR151C 3486 nt3.84□□□□□ -1.8
UFD2P54860 VPS52YDR484W 1926 nt3.83□□□□□ -1.8
UFD2P54860 NAN1YPL126W 2691 nt3.83□□□□□ -1.8
UFD2P54860 PHM6YDR281C 315 nt3.83□□□□□ -1.8
UFD2P54860 PAU10YDR542W 363 nt3.83□□□□□ -1.8
UFD2P54860 PAU11YGL261C 363 nt3.83□□□□□ -1.8
UFD2P54860 PAU4YLR461W 363 nt3.83□□□□□ -1.8
UFD2P54860 KRE5YOR336W 4098 nt3.82□□□□□ -1.8
UFD2P54860 SSM4YIL030C 3960 nt3.82□□□□□ -1.8
UFD2P54860 YPR022CYPR022C 3402 nt3.82□□□□□ -1.8
UFD2P54860 NSP1YJL041W 2472 nt3.82□□□□□ -1.8
UFD2P54860 NUP82YJL061W 2142 nt3.82□□□□□ -1.8
UFD2P54860 YDL041WYDL041W 354 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms