Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 YPR158C-DYPR158C-D 5268 nt3.04□□□□□ -1.92
ATG4P53867 TIF35YDR429C 825 nt3.04□□□□□ -1.92
ATG4P53867 RPL39YJL189W 156 nt3.04□□□□□ -1.92
ATG4P53867 SHE2YKL130C 741 nt3.04□□□□□ -1.92
ATG4P53867 RPS28BYLR264W 204 nt3.04□□□□□ -1.92
ATG4P53867 YOR225WYOR225W 330 nt3.04□□□□□ -1.92
ATG4P53867 PHO81YGR233C 3537 nt3.04□□□□□ -1.92
ATG4P53867 VBA4YDR119W 2307 nt3.04□□□□□ -1.92
ATG4P53867 POL2YNL262W 6669 nt3.04□□□□□ -1.92
ATG4P53867 Q0032Q0032 291 nt3.03□□□□□ -1.92
ATG4P53867 YER039C-AYER039C-A 219 nt3.03□□□□□ -1.92
ATG4P53867 CAJ1YER048C 1176 nt3.03□□□□□ -1.92
ATG4P53867 YER107W-AYER107W-A 321 nt3.03□□□□□ -1.92
ATG4P53867 BAT1YHR208W 1182 nt3.03□□□□□ -1.92
ATG4P53867 URM1YIL008W 300 nt3.03□□□□□ -1.92
ATG4P53867 YLR031WYLR031W 561 nt3.03□□□□□ -1.92
ATG4P53867 YOR073W-AYOR073W-A 234 nt3.03□□□□□ -1.92
ATG4P53867 YPR014CYPR014C 330 nt3.03□□□□□ -1.92
ATG4P53867 PRP22YER013W 3438 nt3.03□□□□□ -1.92
ATG4P53867 DNM1YLL001W 2274 nt3.03□□□□□ -1.92
ATG4P53867 OSH3YHR073W 2991 nt3.03□□□□□ -1.93
ATG4P53867 URB2YJR041C 3525 nt3.02□□□□□ -1.93
ATG4P53867 YCG1YDR325W 3108 nt3.02□□□□□ -1.93
ATG4P53867 TRS120YDR407C 3870 nt3.02□□□□□ -1.93
ATG4P53867 MSR1YHR091C 1932 nt3.02□□□□□ -1.93
ATG4P53867 YDL242WYDL242W 354 nt3.02□□□□□ -1.93
ATG4P53867 YGL074CYGL074C 327 nt3.02□□□□□ -1.93
ATG4P53867 PRE8YML092C 753 nt3.02□□□□□ -1.93
ATG4P53867 RPS7AYOR096W 573 nt3.02□□□□□ -1.93
ATG4P53867 RPS23BYPR132W 438 nt3.02□□□□□ -1.93
ATG4P53867 GYL1YMR192W 2163 nt3.02□□□□□ -1.93
ATG4P53867 YLR352WYLR352W 2424 nt3.02□□□□□ -1.93
ATG4P53867 ALA1YOR335C 2877 nt3.02□□□□□ -1.93
ATG4P53867 STT4YLR305C 5703 nt3.01□□□□□ -1.93
ATG4P53867 DAN4YJR151C 3486 nt3.01□□□□□ -1.93
ATG4P53867 SPG3YDR504C 384 nt3.01□□□□□ -1.93
ATG4P53867 HMF1YER057C 390 nt3.01□□□□□ -1.93
ATG4P53867 YFL065CYFL065C 309 nt3.01□□□□□ -1.93
ATG4P53867 PGA1YNL158W 597 nt3.01□□□□□ -1.93
ATG4P53867 ISU1YPL135W 498 nt3.01□□□□□ -1.93
ATG4P53867 ENA2YDR039C 3276 nt3.01□□□□□ -1.93
ATG4P53867 ENA1YDR040C 3276 nt3.01□□□□□ -1.93
ATG4P53867 CWC22YGR278W 1734 nt3.01□□□□□ -1.93
ATG4P53867 21S_rRNA21S_rRNA 3296 nt3.01□□□□□ -1.93
ATG4P53867 IOC3YFR013W 2364 nt3□□□□□ -1.93
ATG4P53867 YCR018C-AYCR018C-A 255 nt3□□□□□ -1.93
ATG4P53867 TSA2YDR453C 591 nt3□□□□□ -1.93
ATG4P53867 RMT2YDR465C 1239 nt3□□□□□ -1.93
ATG4P53867 HPA3YEL066W 540 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)DtK(UUU)D 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)G1tK(UUU)G1 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)G2tK(UUU)G2 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)KtK(UUU)K 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)LtK(UUU)L 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)OtK(UUU)O 73 nt3□□□□□ -1.93
ATG4P53867 tK(UUU)PtK(UUU)P 73 nt3□□□□□ -1.93
ATG4P53867 RPS23AYGR118W 438 nt3□□□□□ -1.93
ATG4P53867 PAU14YIL176C 363 nt3□□□□□ -1.93
ATG4P53867 PAU1YJL223C 363 nt3□□□□□ -1.93
ATG4P53867 LSM8YJR022W 330 nt3□□□□□ -1.93
ATG4P53867 TIM8YJR135W-A 264 nt3□□□□□ -1.93
ATG4P53867 RPS22BYLR367W 393 nt3□□□□□ -1.93
ATG4P53867 BNI4YNL233W 2679 nt3□□□□□ -1.93
ATG4P53867 SIZ1YDR409W 2715 nt2.99□□□□□ -1.93
ATG4P53867 MDN1YLR106C 14733 nt2.99□□□□□ -1.93
ATG4P53867 YKL183C-AYKL183C-A 213 nt2.99□□□□□ -1.93
ATG4P53867 MTR4YJL050W 3222 nt2.99□□□□□ -1.93
ATG4P53867 YHR078WYHR078W 1659 nt2.98□□□□□ -1.93
ATG4P53867 MET5YJR137C 4329 nt2.98□□□□□ -1.93
ATG4P53867 MSH2YOL090W 2895 nt2.98□□□□□ -1.93
ATG4P53867 YFR056CYFR056C 369 nt2.98□□□□□ -1.93
ATG4P53867 tT(UGU)Q1tT(UGU)Q1 76 nt2.98□□□□□ -1.93
ATG4P53867 ANB1YJR047C 474 nt2.98□□□□□ -1.93
ATG4P53867 IRC23YOR044W 474 nt2.98□□□□□ -1.93
ATG4P53867 NMA111YNL123W 2994 nt2.98□□□□□ -1.93
ATG4P53867 YPR022CYPR022C 3402 nt2.98□□□□□ -1.93
ATG4P53867 TCP1YDR212W 1680 nt2.98□□□□□ -1.93
ATG4P53867 CCT7YJL111W 1653 nt2.98□□□□□ -1.93
ATG4P53867 BIT61YJL058C 1632 nt2.97□□□□□ -1.93
ATG4P53867 MYO5YMR109W 3660 nt2.97□□□□□ -1.93
ATG4P53867 YBP1YBR216C 2025 nt2.97□□□□□ -1.93
ATG4P53867 CDH1YGL003C 1701 nt2.97□□□□□ -1.93
ATG4P53867 ISF1YMR081C 1017 nt2.97□□□□□ -1.93
ATG4P53867 JLP2YMR132C 627 nt2.97□□□□□ -1.93
ATG4P53867 RPS8AYBL072C 603 nt2.97□□□□□ -1.93
ATG4P53867 PDC2YDR081C 2778 nt2.97□□□□□ -1.93
ATG4P53867 COX1Q0045 1605 nt2.97□□□□□ -1.93
ATG4P53867 YDR183C-AYDR183C-A 258 nt2.96□□□□□ -1.94
ATG4P53867 COX7YMR256C 183 nt2.96□□□□□ -1.94
ATG4P53867 MDV1YJL112W 2145 nt2.95□□□□□ -1.94
ATG4P53867 SPP382YLR424W 2127 nt2.95□□□□□ -1.94
ATG4P53867 MNT3YIL014W 1893 nt2.95□□□□□ -1.94
ATG4P53867 ENA5YDR038C 3276 nt2.95□□□□□ -1.94
ATG4P53867 GIS4YML006C 2325 nt2.95□□□□□ -1.94
ATG4P53867 YDR250CYDR250C 276 nt2.95□□□□□ -1.94
ATG4P53867 FCF2YLR051C 654 nt2.95□□□□□ -1.94
ATG4P53867 RPL9BYNL067W 576 nt2.95□□□□□ -1.94
ATG4P53867 YBL073WYBL073W 312 nt2.95□□□□□ -1.94
ATG4P53867 YNL337WYNL337W 255 nt2.95□□□□□ -1.94
ATG4P53867 YPL152W-AYPL152W-A 99 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 202 ms