Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.57■□□□□ 0.88
NUBP1P53384 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC20.57■□□□□ 0.88
NUBP1P53384 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 AL121894.2-201ENST00000602977 491 ntBASIC20.57■□□□□ 0.88
NUBP1P53384 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.57■□□□□ 0.88
NUBP1P53384 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NUBP1P53384 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUBP1P53384 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.56■□□□□ 0.88
NUBP1P53384 CYP2D8P-201ENST00000433633 1490 ntBASIC20.56■□□□□ 0.88
NUBP1P53384 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NUBP1P53384 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NUBP1P53384 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NUBP1P53384 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NUBP1P53384 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.56■□□□□ 0.88
NUBP1P53384 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.56■□□□□ 0.88
NUBP1P53384 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.56■□□□□ 0.88
NUBP1P53384 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.56■□□□□ 0.88
NUBP1P53384 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.56■□□□□ 0.88
NUBP1P53384 BNIP3P41-202ENST00000616656 861 ntBASIC20.56■□□□□ 0.88
NUBP1P53384 AL358472.4-201ENST00000633140 710 ntBASIC20.56■□□□□ 0.88
NUBP1P53384 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.56■□□□□ 0.88
NUBP1P53384 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NUBP1P53384 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUBP1P53384 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NUBP1P53384 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.55■□□□□ 0.88
NUBP1P53384 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.55■□□□□ 0.88
NUBP1P53384 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.55■□□□□ 0.88
NUBP1P53384 AC092473.1-201ENST00000441098 221 ntBASIC20.55■□□□□ 0.88
NUBP1P53384 ATP5G1P1-201ENST00000448724 379 ntBASIC20.55■□□□□ 0.88
NUBP1P53384 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.55■□□□□ 0.88
NUBP1P53384 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.55■□□□□ 0.88
NUBP1P53384 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.55■□□□□ 0.88
NUBP1P53384 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NUBP1P53384 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.55■□□□□ 0.88
NUBP1P53384 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.55■□□□□ 0.88
NUBP1P53384 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NUBP1P53384 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUBP1P53384 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.55■□□□□ 0.88
NUBP1P53384 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NUBP1P53384 NBPF21P-201ENST00000425093 1451 ntBASIC20.55■□□□□ 0.88
NUBP1P53384 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.54■□□□□ 0.88
NUBP1P53384 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NUBP1P53384 AC091917.2-201ENST00000505002 744 ntBASIC20.54■□□□□ 0.88
NUBP1P53384 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
NUBP1P53384 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.54■□□□□ 0.88
NUBP1P53384 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.54■□□□□ 0.88
NUBP1P53384 AC027702.1-201ENST00000563810 1770 ntBASIC20.54■□□□□ 0.88
NUBP1P53384 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUBP1P53384 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
NUBP1P53384 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.53■□□□□ 0.88
NUBP1P53384 AC092068.2-201ENST00000590491 1708 ntBASIC20.53■□□□□ 0.88
NUBP1P53384 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
NUBP1P53384 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
NUBP1P53384 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.53■□□□□ 0.88
NUBP1P53384 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.53■□□□□ 0.88
NUBP1P53384 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
NUBP1P53384 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.53■□□□□ 0.88
NUBP1P53384 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 AP002982.1-201ENST00000492365 877 ntBASIC20.53■□□□□ 0.88
NUBP1P53384 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.53■□□□□ 0.88
NUBP1P53384 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms