Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.93■□□□□ 0.78
PDX1P52945 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDX1P52945 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.93■□□□□ 0.78
PDX1P52945 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.93■□□□□ 0.78
PDX1P52945 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.93■□□□□ 0.78
PDX1P52945 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.93■□□□□ 0.78
PDX1P52945 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
PDX1P52945 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.93■□□□□ 0.78
PDX1P52945 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDX1P52945 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PDX1P52945 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.92■□□□□ 0.78
PDX1P52945 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.92■□□□□ 0.78
PDX1P52945 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDX1P52945 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PDX1P52945 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PDX1P52945 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDX1P52945 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDX1P52945 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDX1P52945 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PDX1P52945 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDX1P52945 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.91■□□□□ 0.78
PDX1P52945 MCRIP2P1-201ENST00000394346 511 ntBASIC19.91■□□□□ 0.78
PDX1P52945 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.91■□□□□ 0.78
PDX1P52945 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.91■□□□□ 0.78
PDX1P52945 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.91■□□□□ 0.78
PDX1P52945 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.91■□□□□ 0.78
PDX1P52945 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.91■□□□□ 0.78
PDX1P52945 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.91■□□□□ 0.78
PDX1P52945 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 AL589743.5-201ENST00000616611 1050 ntBASIC19.91■□□□□ 0.78
PDX1P52945 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDX1P52945 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDX1P52945 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDX1P52945 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.9■□□□□ 0.78
PDX1P52945 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.9■□□□□ 0.78
PDX1P52945 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.9■□□□□ 0.78
PDX1P52945 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.9■□□□□ 0.78
PDX1P52945 AL359736.2-201ENST00000621992 437 ntBASIC19.9■□□□□ 0.78
PDX1P52945 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDX1P52945 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.9■□□□□ 0.78
PDX1P52945 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.9■□□□□ 0.78
PDX1P52945 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PDX1P52945 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.9■□□□□ 0.78
PDX1P52945 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.89■□□□□ 0.77
PDX1P52945 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDX1P52945 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.89■□□□□ 0.77
PDX1P52945 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
PDX1P52945 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PDX1P52945 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDX1P52945 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
PDX1P52945 PNMA6B-201ENST00000538162 1200 ntBASIC19.89■□□□□ 0.77
PDX1P52945 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PDX1P52945 AC244015.2-201ENST00000616358 1861 ntBASIC19.88■□□□□ 0.77
PDX1P52945 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.88■□□□□ 0.77
PDX1P52945 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDX1P52945 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms