Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 ABHD17AP1-201ENST00000358206 933 ntBASIC19.26■□□□□ 0.67
EFNA3P52797 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.26■□□□□ 0.67
EFNA3P52797 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.26■□□□□ 0.67
EFNA3P52797 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
EFNA3P52797 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
EFNA3P52797 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
EFNA3P52797 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EFNA3P52797 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.25■□□□□ 0.67
EFNA3P52797 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.25■□□□□ 0.67
EFNA3P52797 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.25■□□□□ 0.67
EFNA3P52797 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EFNA3P52797 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNA3P52797 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EFNA3P52797 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNA3P52797 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.24■□□□□ 0.67
EFNA3P52797 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.24■□□□□ 0.67
EFNA3P52797 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EFNA3P52797 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.24■□□□□ 0.67
EFNA3P52797 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.24■□□□□ 0.67
EFNA3P52797 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.23■□□□□ 0.67
EFNA3P52797 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.23■□□□□ 0.67
EFNA3P52797 AC007375.3-201ENST00000600936 2314 ntBASIC19.23■□□□□ 0.67
EFNA3P52797 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.23■□□□□ 0.67
EFNA3P52797 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EFNA3P52797 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.23■□□□□ 0.67
EFNA3P52797 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
EFNA3P52797 KRT18P68-201ENST00000392293 1000 ntBASIC19.23■□□□□ 0.67
EFNA3P52797 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.23■□□□□ 0.67
EFNA3P52797 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
EFNA3P52797 TSPY20P-201ENST00000450910 630 ntBASIC19.23■□□□□ 0.67
EFNA3P52797 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EFNA3P52797 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.23■□□□□ 0.67
EFNA3P52797 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EFNA3P52797 AC011484.1-201ENST00000377652 1995 ntBASIC19.23■□□□□ 0.67
EFNA3P52797 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.22■□□□□ 0.67
EFNA3P52797 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.22■□□□□ 0.67
EFNA3P52797 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
EFNA3P52797 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
EFNA3P52797 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.22■□□□□ 0.67
EFNA3P52797 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
EFNA3P52797 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EFNA3P52797 AC005229.4-201ENST00000610085 2198 ntBASIC19.22■□□□□ 0.67
EFNA3P52797 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFNA3P52797 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EFNA3P52797 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNA3P52797 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.21■□□□□ 0.67
EFNA3P52797 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.21■□□□□ 0.67
EFNA3P52797 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFNA3P52797 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
EFNA3P52797 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNA3P52797 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.21■□□□□ 0.67
EFNA3P52797 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms