Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCNKAP51800 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCNKAP51800 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCNKAP51800 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCNKAP51800 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 KRT18P68-201ENST00000392293 1000 ntBASIC20.13■□□□□ 0.81
CLCNKAP51800 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLCNKAP51800 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLCNKAP51800 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 AC091874.3-201ENST00000512672 1195 ntBASIC20.13■□□□□ 0.81
CLCNKAP51800 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.13■□□□□ 0.81
CLCNKAP51800 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCNKAP51800 AL589743.5-201ENST00000616611 1050 ntBASIC20.13■□□□□ 0.81
CLCNKAP51800 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCNKAP51800 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CLCNKAP51800 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CLCNKAP51800 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCNKAP51800 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLCNKAP51800 LSM12P1-201ENST00000411836 588 ntBASIC20.12■□□□□ 0.81
CLCNKAP51800 AL355472.2-201ENST00000422958 438 ntBASIC20.12■□□□□ 0.81
CLCNKAP51800 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLCNKAP51800 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCNKAP51800 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.12■□□□□ 0.81
CLCNKAP51800 AC097658.1-201ENST00000475555 843 ntBASIC20.12■□□□□ 0.81
CLCNKAP51800 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLCNKAP51800 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 KRT17P1-201ENST00000399211 1546 ntBASIC20.12■□□□□ 0.81
CLCNKAP51800 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLCNKAP51800 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCNKAP51800 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCNKAP51800 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.11■□□□□ 0.81
CLCNKAP51800 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.11■□□□□ 0.81
CLCNKAP51800 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.11■□□□□ 0.81
CLCNKAP51800 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCNKAP51800 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.11■□□□□ 0.81
CLCNKAP51800 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.11■□□□□ 0.81
CLCNKAP51800 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLCNKAP51800 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 AC011484.1-201ENST00000377652 1995 ntBASIC20.11■□□□□ 0.81
CLCNKAP51800 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.11■□□□□ 0.81
CLCNKAP51800 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCNKAP51800 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
CLCNKAP51800 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCNKAP51800 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLCNKAP51800 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCNKAP51800 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCNKAP51800 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.1■□□□□ 0.81
CLCNKAP51800 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLCNKAP51800 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms