Protein–RNA interactions for Protein: P47224

RABIF, Guanine nucleotide exchange factor MSS4, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABIFP47224 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 SOX15-203ENST00000570788 1093 ntBASIC20.19■□□□□ 0.82
RABIFP47224 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.19■□□□□ 0.82
RABIFP47224 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RABIFP47224 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RABIFP47224 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RABIFP47224 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RABIFP47224 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RABIFP47224 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.18■□□□□ 0.82
RABIFP47224 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.18■□□□□ 0.82
RABIFP47224 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.18■□□□□ 0.82
RABIFP47224 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RABIFP47224 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.18■□□□□ 0.82
RABIFP47224 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.18■□□□□ 0.82
RABIFP47224 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RABIFP47224 AC011484.1-201ENST00000377652 1995 ntBASIC20.17■□□□□ 0.82
RABIFP47224 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RABIFP47224 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RABIFP47224 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.17■□□□□ 0.82
RABIFP47224 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RABIFP47224 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RABIFP47224 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.17■□□□□ 0.82
RABIFP47224 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RABIFP47224 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.17■□□□□ 0.82
RABIFP47224 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RABIFP47224 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.17■□□□□ 0.82
RABIFP47224 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RABIFP47224 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RABIFP47224 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.16■□□□□ 0.82
RABIFP47224 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
RABIFP47224 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
RABIFP47224 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RABIFP47224 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.16■□□□□ 0.82
RABIFP47224 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.16■□□□□ 0.82
RABIFP47224 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RABIFP47224 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.15■□□□□ 0.82
RABIFP47224 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.15■□□□□ 0.82
RABIFP47224 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.15■□□□□ 0.82
RABIFP47224 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RABIFP47224 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
RABIFP47224 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RABIFP47224 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RABIFP47224 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.14■□□□□ 0.81
RABIFP47224 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.14■□□□□ 0.81
RABIFP47224 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.14■□□□□ 0.81
RABIFP47224 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.14■□□□□ 0.81
RABIFP47224 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RABIFP47224 Z98882.1-201ENST00000622160 2253 ntBASIC20.14■□□□□ 0.81
RABIFP47224 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RABIFP47224 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.13■□□□□ 0.81
RABIFP47224 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RABIFP47224 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.13■□□□□ 0.81
RABIFP47224 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.13■□□□□ 0.81
RABIFP47224 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RABIFP47224 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms