Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 IKBKGP1-201ENST00000612193 1073 ntBASIC19.56■□□□□ 0.72
SSR2P43308 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR2P43308 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SSR2P43308 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
SSR2P43308 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR2P43308 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR2P43308 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR2P43308 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SSR2P43308 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR2P43308 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.55■□□□□ 0.72
SSR2P43308 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR2P43308 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SSR2P43308 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SSR2P43308 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SSR2P43308 AC007322.4-201ENST00000509611 723 ntBASIC19.55■□□□□ 0.72
SSR2P43308 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SSR2P43308 DUX4L16-201ENST00000555130 1264 ntBASIC19.55■□□□□ 0.72
SSR2P43308 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.55■□□□□ 0.72
SSR2P43308 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SSR2P43308 AL591742.1-201ENST00000604433 565 ntBASIC19.55■□□□□ 0.72
SSR2P43308 AL137784.2-201ENST00000607332 1000 ntBASIC19.55■□□□□ 0.72
SSR2P43308 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.55■□□□□ 0.72
SSR2P43308 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.55■□□□□ 0.72
SSR2P43308 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SSR2P43308 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
SSR2P43308 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR2P43308 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR2P43308 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
SSR2P43308 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR2P43308 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SSR2P43308 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SSR2P43308 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR2P43308 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR2P43308 FP700111.2-201ENST00000619190 1892 ntBASIC19.54■□□□□ 0.72
SSR2P43308 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR2P43308 AC092437.1-201ENST00000624794 1048 ntBASIC19.54■□□□□ 0.72
SSR2P43308 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SSR2P43308 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR2P43308 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SSR2P43308 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SSR2P43308 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 AC007225.1-201ENST00000566331 1836 ntBASIC19.53■□□□□ 0.72
SSR2P43308 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
SSR2P43308 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SSR2P43308 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.53■□□□□ 0.72
SSR2P43308 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR2P43308 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR2P43308 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 AC027702.1-201ENST00000563810 1770 ntBASIC19.52■□□□□ 0.72
SSR2P43308 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR2P43308 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR2P43308 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR2P43308 CNN2P6-201ENST00000439038 900 ntBASIC19.52■□□□□ 0.72
SSR2P43308 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSR2P43308 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.52■□□□□ 0.72
SSR2P43308 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.52■□□□□ 0.72
SSR2P43308 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSR2P43308 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms