Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YCK3YER123W 1575 nt3.95□□□□□ -1.78
MSH4P40965 YCR081C-AYCR081C-A 237 nt3.95□□□□□ -1.78
MSH4P40965 RPS23AYGR118W 438 nt3.95□□□□□ -1.78
MSH4P40965 HYR1YIR037W 492 nt3.95□□□□□ -1.78
MSH4P40965 RPS7BYNL096C 573 nt3.95□□□□□ -1.78
MSH4P40965 YOL085W-AYOL085W-A 213 nt3.95□□□□□ -1.78
MSH4P40965 PFY1YOR122C 381 nt3.95□□□□□ -1.78
MSH4P40965 YPL039WYPL039W 951 nt3.95□□□□□ -1.78
MSH4P40965 RPS23BYPR132W 438 nt3.95□□□□□ -1.78
MSH4P40965 SET1YHR119W 3243 nt3.95□□□□□ -1.78
MSH4P40965 RPN2YIL075C 2838 nt3.95□□□□□ -1.78
MSH4P40965 FAS1YKL182W 6156 nt3.95□□□□□ -1.78
MSH4P40965 SHQ1YIL104C 1524 nt3.95□□□□□ -1.78
MSH4P40965 ARO1YDR127W 4767 nt3.94□□□□□ -1.78
MSH4P40965 YAK1YJL141C 2424 nt3.94□□□□□ -1.78
MSH4P40965 STE14YDR410C 720 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)DtK(UUU)D 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)G1tK(UUU)G1 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)G2tK(UUU)G2 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)KtK(UUU)K 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)LtK(UUU)L 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)OtK(UUU)O 73 nt3.94□□□□□ -1.78
MSH4P40965 tK(UUU)PtK(UUU)P 73 nt3.94□□□□□ -1.78
MSH4P40965 USE1YGL098W 738 nt3.94□□□□□ -1.78
MSH4P40965 NTC20YBR188C 423 nt3.94□□□□□ -1.78
MSH4P40965 snR51snR51 107 nt3.94□□□□□ -1.78
MSH4P40965 DAN4YJR151C 3486 nt3.94□□□□□ -1.78
MSH4P40965 IRC10YOL015W 1761 nt3.94□□□□□ -1.78
MSH4P40965 YBP1YBR216C 2025 nt3.94□□□□□ -1.78
MSH4P40965 SPC72YAL047C 1869 nt3.93□□□□□ -1.78
MSH4P40965 LCB4YOR171C 1875 nt3.93□□□□□ -1.78
MSH4P40965 CDC36YDL165W 576 nt3.93□□□□□ -1.78
MSH4P40965 HMF1YER057C 390 nt3.93□□□□□ -1.78
MSH4P40965 RPB9YGL070C 369 nt3.93□□□□□ -1.78
MSH4P40965 YIR040CYIR040C 333 nt3.93□□□□□ -1.78
MSH4P40965 TVP18YMR071C 504 nt3.93□□□□□ -1.78
MSH4P40965 YPL080CYPL080C 327 nt3.93□□□□□ -1.78
MSH4P40965 URB2YJR041C 3525 nt3.93□□□□□ -1.78
MSH4P40965 NDD1YOR372C 1665 nt3.93□□□□□ -1.78
MSH4P40965 YPR022CYPR022C 3402 nt3.93□□□□□ -1.78
MSH4P40965 MSH4YFL003C 2637 nt3.92□□□□□ -1.78
MSH4P40965 YDL180WYDL180W 1644 nt3.92□□□□□ -1.78
MSH4P40965 FLO5YHR211W 3228 nt3.92□□□□□ -1.78
MSH4P40965 tV(CAC)DtV(CAC)D 73 nt3.92□□□□□ -1.78
MSH4P40965 tV(CAC)HtV(CAC)H 73 nt3.92□□□□□ -1.78
MSH4P40965 YAL064W-BYAL064W-B 381 nt3.92□□□□□ -1.78
MSH4P40965 RPS7AYOR096W 573 nt3.92□□□□□ -1.78
MSH4P40965 YCG1YDR325W 3108 nt3.92□□□□□ -1.78
MSH4P40965 ISD11YER048W-A 285 nt3.91□□□□□ -1.78
MSH4P40965 NOP19YGR251W 591 nt3.91□□□□□ -1.78
MSH4P40965 PFD1YJL179W 330 nt3.91□□□□□ -1.78
MSH4P40965 YJL182CYJL182C 318 nt3.91□□□□□ -1.78
MSH4P40965 SRL3YKR091W 741 nt3.91□□□□□ -1.78
MSH4P40965 YPL238CYPL238C 390 nt3.91□□□□□ -1.78
MSH4P40965 SLM6YBR266C 453 nt3.91□□□□□ -1.78
MSH4P40965 YLR001CYLR001C 2589 nt3.91□□□□□ -1.78
MSH4P40965 PFK26YIL107C 2484 nt3.9□□□□□ -1.78
MSH4P40965 CWH41YGL027C 2502 nt3.9□□□□□ -1.78
MSH4P40965 MNT3YIL014W 1893 nt3.9□□□□□ -1.78
MSH4P40965 MSH2YOL090W 2895 nt3.9□□□□□ -1.78
MSH4P40965 ERG28YER044C 447 nt3.9□□□□□ -1.79
MSH4P40965 YER066C-AYER066C-A 501 nt3.9□□□□□ -1.79
MSH4P40965 SHH3YMR118C 591 nt3.9□□□□□ -1.79
MSH4P40965 YMR307C-AYMR307C-A 195 nt3.9□□□□□ -1.79
MSH4P40965 RPL9BYNL067W 576 nt3.9□□□□□ -1.79
MSH4P40965 RPS8AYBL072C 603 nt3.9□□□□□ -1.79
MSH4P40965 EMP70YLR083C 2004 nt3.9□□□□□ -1.79
MSH4P40965 VPS3YDR495C 3036 nt3.89□□□□□ -1.79
MSH4P40965 YKL222CYKL222C 2118 nt3.89□□□□□ -1.79
MSH4P40965 YSW1YBR148W 1830 nt3.89□□□□□ -1.79
MSH4P40965 PBS2YJL128C 2007 nt3.89□□□□□ -1.79
MSH4P40965 KHA1YJL094C 2622 nt3.89□□□□□ -1.79
MSH4P40965 YDR169C-AYDR169C-A 150 nt3.89□□□□□ -1.79
MSH4P40965 YER091C-AYER091C-A 222 nt3.89□□□□□ -1.79
MSH4P40965 RPS26BYER131W 360 nt3.89□□□□□ -1.79
MSH4P40965 Q0143Q0143 153 nt3.89□□□□□ -1.79
MSH4P40965 IRC23YOR044W 474 nt3.89□□□□□ -1.79
MSH4P40965 YPL229WYPL229W 621 nt3.89□□□□□ -1.79
MSH4P40965 STE23YLR389C 3084 nt3.89□□□□□ -1.79
MSH4P40965 SQS1YNL224C 2304 nt3.89□□□□□ -1.79
MSH4P40965 YKL100CYKL100C 1764 nt3.89□□□□□ -1.79
MSH4P40965 DLS1YJL065C 504 nt3.88□□□□□ -1.79
MSH4P40965 RPS21BYJL136C 264 nt3.88□□□□□ -1.79
MSH4P40965 PRE8YML092C 753 nt3.88□□□□□ -1.79
MSH4P40965 BNI4YNL233W 2679 nt3.88□□□□□ -1.79
MSH4P40965 TLC1TLC1 1301 nt3.88□□□□□ -1.79
MSH4P40965 KIN82YCR091W 2163 nt3.87□□□□□ -1.79
MSH4P40965 MSR1YHR091C 1932 nt3.87□□□□□ -1.79
MSH4P40965 SSP1YHR184W 1716 nt3.87□□□□□ -1.79
MSH4P40965 YFR056CYFR056C 369 nt3.87□□□□□ -1.79
MSH4P40965 RPL30YGL030W 318 nt3.87□□□□□ -1.79
MSH4P40965 YLR466C-BYLR466C-B 117 nt3.87□□□□□ -1.79
MSH4P40965 LSM2YBL026W 288 nt3.87□□□□□ -1.79
MSH4P40965 SMC3YJL074C 3693 nt3.86□□□□□ -1.79
MSH4P40965 YBL073WYBL073W 312 nt3.86□□□□□ -1.79
MSH4P40965 SMC2YFR031C 3513 nt3.85□□□□□ -1.79
MSH4P40965 YEL018C-AYEL018C-A 534 nt3.85□□□□□ -1.79
MSH4P40965 YGR151CYGR151C 336 nt3.85□□□□□ -1.79
MSH4P40965 YCL023CYCL023C 348 nt3.85□□□□□ -1.79
MSH4P40965 MYO5YMR109W 3660 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 45.6 ms