Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CEACAM3P40198 AC026185.1-201ENST00000445748 174 ntBASIC16.73■□□□□ 0.27
CEACAM3P40198 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CEACAM3P40198 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CEACAM3P40198 FAM21FP-204ENST00000608637 956 ntBASIC16.73■□□□□ 0.27
CEACAM3P40198 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.73■□□□□ 0.27
CEACAM3P40198 AC073111.5-205ENST00000641717 521 ntBASIC16.73■□□□□ 0.27
CEACAM3P40198 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CEACAM3P40198 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.73■□□□□ 0.27
CEACAM3P40198 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.73■□□□□ 0.27
CEACAM3P40198 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CEACAM3P40198 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CEACAM3P40198 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CEACAM3P40198 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.72■□□□□ 0.27
CEACAM3P40198 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CEACAM3P40198 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.72■□□□□ 0.27
CEACAM3P40198 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CEACAM3P40198 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CEACAM3P40198 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CEACAM3P40198 CNN2P6-201ENST00000439038 900 ntBASIC16.71■□□□□ 0.27
CEACAM3P40198 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CEACAM3P40198 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.71■□□□□ 0.27
CEACAM3P40198 AC005181.1-201ENST00000604782 1256 ntBASIC16.71■□□□□ 0.27
CEACAM3P40198 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CEACAM3P40198 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 AF106564.1-201ENST00000607058 2553 ntBASIC16.7■□□□□ 0.26
CEACAM3P40198 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.7■□□□□ 0.26
CEACAM3P40198 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CEACAM3P40198 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.7■□□□□ 0.26
CEACAM3P40198 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.7■□□□□ 0.26
CEACAM3P40198 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 PGM5P4-201ENST00000421970 445 ntBASIC16.7■□□□□ 0.26
CEACAM3P40198 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.7■□□□□ 0.26
CEACAM3P40198 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
CEACAM3P40198 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 AC068338.2-201ENST00000563278 1430 ntBASIC16.7■□□□□ 0.26
CEACAM3P40198 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CEACAM3P40198 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 AC007375.3-201ENST00000600936 2314 ntBASIC16.69■□□□□ 0.26
CEACAM3P40198 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CEACAM3P40198 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CEACAM3P40198 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.69■□□□□ 0.26
CEACAM3P40198 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.69■□□□□ 0.26
CEACAM3P40198 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.69■□□□□ 0.26
CEACAM3P40198 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.69■□□□□ 0.26
CEACAM3P40198 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 OR10C1-204ENST00000622521 1039 ntBASIC16.69■□□□□ 0.26
CEACAM3P40198 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CEACAM3P40198 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CEACAM3P40198 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.68■□□□□ 0.26
CEACAM3P40198 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.68■□□□□ 0.26
CEACAM3P40198 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.68■□□□□ 0.26
CEACAM3P40198 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.68■□□□□ 0.26
CEACAM3P40198 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CEACAM3P40198 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms