Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.4■■□□□ 1.02
SCNN1AP37088 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.4■■□□□ 1.02
SCNN1AP37088 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
SCNN1AP37088 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.4■■□□□ 1.02
SCNN1AP37088 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SCNN1AP37088 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.4■■□□□ 1.02
SCNN1AP37088 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SCNN1AP37088 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.39■■□□□ 1.02
SCNN1AP37088 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCNN1AP37088 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SCNN1AP37088 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.39■■□□□ 1.02
SCNN1AP37088 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 MIR663A-201ENST00000385250 93 ntBASIC21.39■■□□□ 1.01
SCNN1AP37088 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.39■■□□□ 1.01
SCNN1AP37088 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.39■■□□□ 1.01
SCNN1AP37088 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.39■■□□□ 1.01
SCNN1AP37088 AL356652.1-201ENST00000615962 565 ntBASIC21.39■■□□□ 1.01
SCNN1AP37088 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SCNN1AP37088 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 AC010980.2-201ENST00000587099 1412 ntBASIC21.38■■□□□ 1.01
SCNN1AP37088 AL121603.2-201ENST00000557373 2117 ntBASIC21.38■■□□□ 1.01
SCNN1AP37088 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
SCNN1AP37088 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.38■■□□□ 1.01
SCNN1AP37088 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.38■■□□□ 1.01
SCNN1AP37088 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.38■■□□□ 1.01
SCNN1AP37088 CYP2T3P-201ENST00000601990 817 ntBASIC21.38■■□□□ 1.01
SCNN1AP37088 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
SCNN1AP37088 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.38■■□□□ 1.01
SCNN1AP37088 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.38■■□□□ 1.01
SCNN1AP37088 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SCNN1AP37088 FEM1AP1-201ENST00000431297 1995 ntBASIC21.37■■□□□ 1.01
SCNN1AP37088 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.37■■□□□ 1.01
SCNN1AP37088 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.37■■□□□ 1.01
SCNN1AP37088 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.37■■□□□ 1.01
SCNN1AP37088 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.37■■□□□ 1.01
SCNN1AP37088 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 AP005212.1-201ENST00000581547 1997 ntBASIC21.37■■□□□ 1.01
SCNN1AP37088 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SCNN1AP37088 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.37■■□□□ 1.01
SCNN1AP37088 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SCNN1AP37088 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.36■■□□□ 1.01
SCNN1AP37088 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.36■■□□□ 1.01
SCNN1AP37088 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.36■■□□□ 1.01
SCNN1AP37088 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SCNN1AP37088 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.36■■□□□ 1.01
SCNN1AP37088 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SCNN1AP37088 GABARAPL3-202ENST00000624044 1851 ntBASIC21.36■■□□□ 1.01
SCNN1AP37088 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
SCNN1AP37088 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCNN1AP37088 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.36■■□□□ 1.01
SCNN1AP37088 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCNN1AP37088 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCNN1AP37088 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCNN1AP37088 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCNN1AP37088 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.35■■□□□ 1.01
SCNN1AP37088 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
SCNN1AP37088 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCNN1AP37088 KRT18P68-201ENST00000392293 1000 ntBASIC21.35■■□□□ 1.01
SCNN1AP37088 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.35■■□□□ 1.01
SCNN1AP37088 AC093787.1-201ENST00000450396 207 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms