Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.7■□□□□ 0.9
RPA3P35244 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 YBX1P1-201ENST00000445822 960 ntBASIC20.7■□□□□ 0.9
RPA3P35244 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.7■□□□□ 0.9
RPA3P35244 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RPA3P35244 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.7■□□□□ 0.9
RPA3P35244 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RPA3P35244 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 AC005224.4-201ENST00000583262 1652 ntBASIC20.69■□□□□ 0.9
RPA3P35244 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.69■□□□□ 0.9
RPA3P35244 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RPA3P35244 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.68■□□□□ 0.9
RPA3P35244 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPA3P35244 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RPA3P35244 AC123595.1-201ENST00000440769 1046 ntBASIC20.68■□□□□ 0.9
RPA3P35244 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.68■□□□□ 0.9
RPA3P35244 TPRG1LP1-201ENST00000598702 760 ntBASIC20.68■□□□□ 0.9
RPA3P35244 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RPA3P35244 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
RPA3P35244 LINC02228-203ENST00000641970 1355 ntBASIC20.68■□□□□ 0.9
RPA3P35244 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.68■□□□□ 0.9
RPA3P35244 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.68■□□□□ 0.9
RPA3P35244 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RPA3P35244 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.67■□□□□ 0.9
RPA3P35244 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.67■□□□□ 0.9
RPA3P35244 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
RPA3P35244 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.67■□□□□ 0.9
RPA3P35244 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.67■□□□□ 0.9
RPA3P35244 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.67■□□□□ 0.9
RPA3P35244 AC087289.5-201ENST00000586076 3175 ntBASIC20.67■□□□□ 0.9
RPA3P35244 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RPA3P35244 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
RPA3P35244 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
RPA3P35244 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RPA3P35244 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RPA3P35244 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RPA3P35244 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RPA3P35244 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.66■□□□□ 0.9
RPA3P35244 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPA3P35244 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.66■□□□□ 0.9
RPA3P35244 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RPA3P35244 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.66■□□□□ 0.9
RPA3P35244 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
RPA3P35244 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPA3P35244 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.65■□□□□ 0.9
RPA3P35244 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.65■□□□□ 0.9
RPA3P35244 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RPA3P35244 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.65■□□□□ 0.9
RPA3P35244 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RPA3P35244 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPA3P35244 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPA3P35244 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RPA3P35244 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RPA3P35244 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.64■□□□□ 0.89
RPA3P35244 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPA3P35244 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPA3P35244 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPA3P35244 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.64■□□□□ 0.89
RPA3P35244 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms