Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHA3P29320 TSPY26P-201ENST00000476365 1326 ntBASIC19.94■□□□□ 0.78
EPHA3P29320 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA3P29320 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
EPHA3P29320 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA3P29320 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.94■□□□□ 0.78
EPHA3P29320 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.94■□□□□ 0.78
EPHA3P29320 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.93■□□□□ 0.78
EPHA3P29320 EEF1DP3-203ENST00000566025 782 ntBASIC19.93■□□□□ 0.78
EPHA3P29320 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
EPHA3P29320 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
EPHA3P29320 AC092720.2-201ENST00000602388 1665 ntBASIC19.93■□□□□ 0.78
EPHA3P29320 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
EPHA3P29320 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
EPHA3P29320 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
EPHA3P29320 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHA3P29320 AC053503.5-201ENST00000601508 636 ntBASIC19.92■□□□□ 0.78
EPHA3P29320 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.92■□□□□ 0.78
EPHA3P29320 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
EPHA3P29320 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 TCF3P1-201ENST00000423021 1937 ntBASIC19.92■□□□□ 0.78
EPHA3P29320 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
EPHA3P29320 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
EPHA3P29320 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA3P29320 AC099791.1-201ENST00000416440 715 ntBASIC19.91■□□□□ 0.78
EPHA3P29320 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
EPHA3P29320 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHA3P29320 AC135279.3-201ENST00000610945 1311 ntBASIC19.91■□□□□ 0.78
EPHA3P29320 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA3P29320 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.91■□□□□ 0.78
EPHA3P29320 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA3P29320 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
EPHA3P29320 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA3P29320 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
EPHA3P29320 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.9■□□□□ 0.78
EPHA3P29320 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.9■□□□□ 0.78
EPHA3P29320 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA3P29320 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.9■□□□□ 0.78
EPHA3P29320 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.9■□□□□ 0.78
EPHA3P29320 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
EPHA3P29320 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA3P29320 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
EPHA3P29320 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA3P29320 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA3P29320 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
EPHA3P29320 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
EPHA3P29320 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
EPHA3P29320 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
EPHA3P29320 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA3P29320 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA3P29320 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
EPHA3P29320 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
EPHA3P29320 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms