Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC11.83□□□□□ -0.517e-7■■■■□ 25.3
RPS3P23396 RPUSD3-211ENST00000464783 1149 ntTSL 211.76□□□□□ -0.537e-7■■■■□ 25.3
RPS3P23396 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.537e-7■■■■□ 25.3
RPS3P23396 GABARAP-206ENST00000577035 762 ntTSL 2 BASIC11.7□□□□□ -0.547e-7■■■■□ 25.3
RPS3P23396 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC11.67□□□□□ -0.547e-7■■■■□ 25.3
RPS3P23396 AC120057.3-201ENST00000570760 776 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.547e-7■■■■□ 25.3
RPS3P23396 COX16-204ENST00000557612 627 ntTSL 211.65□□□□□ -0.547e-7■■■■□ 25.3
RPS3P23396 AL603832.3-202ENST00000607158 807 ntTSL 511.59□□□□□ -0.557e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.567e-7■■■■□ 25.3
RPS3P23396 NTPCR-207ENST00000494689 767 ntTSL 211.41□□□□□ -0.587e-7■■■■□ 25.3
RPS3P23396 GAPDHP65-201ENST00000425487 1006 ntBASIC11.37□□□□□ -0.597e-7■■■■□ 25.3
RPS3P23396 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC11.28□□□□□ -0.67e-7■■■■□ 25.3
RPS3P23396 C6orf136-209ENST00000468785 492 ntTSL 211.27□□□□□ -0.617e-7■■■■□ 25.3
RPS3P23396 C6orf136-205ENST00000460172 253 ntTSL 211.24□□□□□ -0.617e-7■■■■□ 25.3
RPS3P23396 PPOX-218ENST00000541818 1193 ntTSL 211.2□□□□□ -0.627e-7■■■■□ 25.3
RPS3P23396 AL603832.3-204ENST00000605933 744 ntAPPRIS ALT2 TSL 511.12□□□□□ -0.637e-7■■■■□ 25.3
RPS3P23396 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.637e-7■■■■□ 25.3
RPS3P23396 DCTN4-210ENST00000521093 473 ntTSL 411.11□□□□□ -0.637e-7■■■■□ 25.3
RPS3P23396 NTPCR-208ENST00000496662 882 ntTSL 211.1□□□□□ -0.637e-7■■■■□ 25.3
RPS3P23396 COX16-201ENST00000389912 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.637e-7■■■■□ 25.3
RPS3P23396 SYNJ2BP-COX16-203ENST00000617196 580 ntAPPRIS ALT2 TSL 210.87□□□□□ -0.677e-7■■■■□ 25.3
RPS3P23396 ELP4-205ENST00000638184 1330 ntTSL 510.84□□□□□ -0.677e-7■■■■□ 25.3
RPS3P23396 AL603832.3-201ENST00000471038 792 ntTSL 210.81□□□□□ -0.687e-7■■■■□ 25.3
RPS3P23396 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.687e-7■■■■□ 25.3
RPS3P23396 C6orf136-207ENST00000465699 692 ntTSL 310.7□□□□□ -0.77e-7■■■■□ 25.3
RPS3P23396 EXOSC2-204ENST00000372358 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.717e-7■■■■□ 25.3
RPS3P23396 EXOSC2-201ENST00000372350 606 ntTSL 510.55□□□□□ -0.727e-7■■■■□ 25.3
RPS3P23396 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC10.54□□□□□ -0.727e-7■■■■□ 25.3
RPS3P23396 PPOX-215ENST00000537523 734 ntTSL 310.38□□□□□ -0.757e-7■■■■□ 25.3
RPS3P23396 PPOX-216ENST00000537829 728 ntTSL 210.31□□□□□ -0.767e-7■■■■□ 25.3
RPS3P23396 MORF4L1-210ENST00000558893 1209 ntTSL 1 (best)10.25□□□□□ -0.777e-7■■■■□ 25.3
RPS3P23396 NTPCR-206ENST00000490807 980 ntTSL 210.19□□□□□ -0.787e-7■■■■□ 25.3
RPS3P23396 ELP4-210ENST00000638482 3084 ntTSL 5 BASIC10.1□□□□□ -0.797e-7■■■■□ 25.3
RPS3P23396 MAT2A-203ENST00000465151 583 ntTSL 210□□□□□ -0.817e-7■■■■□ 25.3
RPS3P23396 EXOSC2-202ENST00000372351 1885 ntTSL 5 BASIC9.89□□□□□ -0.837e-7■■■■□ 25.3
RPS3P23396 CTNND1-228ENST00000531007 848 ntTSL 49.81□□□□□ -0.847e-7■■■■□ 25.3
RPS3P23396 NTPCR-203ENST00000479125 761 ntTSL 39.8□□□□□ -0.847e-7■■■■□ 25.3
RPS3P23396 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.857e-7■■■■□ 25.3
RPS3P23396 METTL5-212ENST00000538491 235 ntTSL 59.59□□□□□ -0.877e-7■■■■□ 25.3
RPS3P23396 NUDT5-208ENST00000498825 473 ntTSL 29.5□□□□□ -0.897e-7■■■■□ 25.3
RPS3P23396 NUDT5-206ENST00000476462 622 ntTSL 29.5□□□□□ -0.897e-7■■■■□ 25.3
RPS3P23396 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC9.5□□□□□ -0.897e-7■■■■□ 25.3
RPS3P23396 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.97e-7■■■■□ 25.3
RPS3P23396 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC9.4□□□□□ -0.917e-7■■■■□ 25.3
RPS3P23396 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.917e-7■■■■□ 25.3
RPS3P23396 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC9.3□□□□□ -0.927e-7■■■■□ 25.3
RPS3P23396 PPOX-206ENST00000466452 784 ntTSL 29.22□□□□□ -0.937e-7■■■■□ 25.3
RPS3P23396 DCTN4-211ENST00000521448 585 ntTSL 59.03□□□□□ -0.967e-7■■■■□ 25.3
RPS3P23396 ERAL1-204ENST00000471992 1508 ntTSL 59□□□□□ -0.977e-7■■■■□ 25.3
RPS3P23396 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC8.95□□□□□ -0.987e-7■■■■□ 25.3
RPS3P23396 EXOSC2-205ENST00000430138 2533 ntTSL 28.91□□□□□ -0.987e-7■■■■□ 25.3
RPS3P23396 RHOC-211ENST00000436685 517 ntTSL 58.82□□□□□ -17e-7■■■■□ 25.3
RPS3P23396 EXOSC2-206ENST00000463488 699 ntTSL 28.78□□□□□ -17e-7■■■■□ 25.3
RPS3P23396 EXOSC2-210ENST00000495699 709 ntTSL 38.78□□□□□ -17e-7■■■■□ 25.3
RPS3P23396 RPP30-204ENST00000414836 726 ntTSL 38.76□□□□□ -1.019e-10■■■■□ 25.3
RPS3P23396 PNP-206ENST00000556293 1023 ntTSL 1 (best)8.75□□□□□ -1.019e-10■■■■□ 25.3
RPS3P23396 DCTN4-205ENST00000518015 579 ntTSL 38.33□□□□□ -1.087e-7■■■■□ 25.3
RPS3P23396 PAPSS1-205ENST00000511304 927 ntTSL 38.28□□□□□ -1.087e-7■■■■□ 25.3
RPS3P23396 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.17e-7■■■■□ 25.3
RPS3P23396 POLR2H-213ENST00000490958 434 ntTSL 28.13□□□□□ -1.119e-10■■■■□ 25.3
RPS3P23396 KPNA6-204ENST00000471599 3941 ntTSL 27.94□□□□□ -1.149e-10■■■■□ 25.3
RPS3P23396 NUDT5-204ENST00000378952 917 ntTSL 57.9□□□□□ -1.147e-7■■■■□ 25.3
RPS3P23396 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.83□□□□□ -1.167e-7■■■■□ 25.3
RPS3P23396 EXOSC2-208ENST00000490641 699 ntTSL 37.74□□□□□ -1.177e-7■■■■□ 25.3
RPS3P23396 EXOSC2-209ENST00000491115 739 ntTSL 57.68□□□□□ -1.187e-7■■■■□ 25.3
RPS3P23396 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.239e-10■■■■□ 25.3
RPS3P23396 RPP30-210ENST00000489806 1315 ntTSL 57.36□□□□□ -1.239e-10■■■■□ 25.3
RPS3P23396 DCTN4-212ENST00000521533 578 ntTSL 46.98□□□□□ -1.297e-7■■■■□ 25.3
RPS3P23396 PMPCB-207ENST00000469560 1615 ntTSL 26.94□□□□□ -1.37e-7■■■■□ 25.3
RPS3P23396 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC6.94□□□□□ -1.37e-7■■■■□ 25.3
RPS3P23396 MAT2A-204ENST00000469221 691 ntTSL 26.88□□□□□ -1.317e-7■■■■□ 25.3
RPS3P23396 EXOSC3-206ENST00000489414 535 ntTSL 46.53□□□□□ -1.369e-10■■■■□ 25.3
RPS3P23396 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.27□□□□□ -1.417e-7■■■■□ 25.3
RPS3P23396 RPP30-208ENST00000480406 701 ntTSL 56.15□□□□□ -1.429e-10■■■■□ 25.3
RPS3P23396 MORF4L1-213ENST00000559244 582 ntTSL 36.13□□□□□ -1.437e-7■■■■□ 25.3
RPS3P23396 MORF4L1-218ENST00000559697 551 ntTSL 55.96□□□□□ -1.467e-7■■■■□ 25.3
RPS3P23396 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.92□□□□□ -1.467e-7■■■■□ 25.3
RPS3P23396 SYNJ2BP-COX16-202ENST00000617124 479 ntAPPRIS ALT2 TSL 25.33□□□□□ -1.567e-7■■■■□ 25.3
RPS3P23396 ATP6V1H-208ENST00000521275 403 ntTSL 54.94□□□□□ -1.627e-7■■■■□ 25.3
RPS3P23396 DSCR8-207ENST00000495344 606 ntTSL 24.9□□□□□ -1.632e-7■■■■□ 25.3
RPS3P23396 ERAL1-205ENST00000577942 698 ntTSL 24.89□□□□□ -1.637e-7■■■■□ 25.3
RPS3P23396 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.667e-7■■■■□ 25.3
RPS3P23396 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.43□□□□□ -1.77e-7■■■■□ 25.3
RPS3P23396 MORF4L1-206ENST00000558522 1074 ntTSL 24.27□□□□□ -1.737e-7■■■■□ 25.3
RPS3P23396 DSCR8-206ENST00000478613 716 ntTSL 23.93□□□□□ -1.782e-7■■■■□ 25.3
RPS3P23396 DSCR8-203ENST00000465532 791 ntTSL 23.82□□□□□ -1.82e-7■■■■□ 25.3
RPS3P23396 MORF4L1-216ENST00000559619 448 ntTSL 23.69□□□□□ -1.827e-7■■■■□ 25.3
RPS3P23396 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.68□□□□□ -1.822e-7■■■■□ 25.3
RPS3P23396 DSCR8-204ENST00000469658 437 ntTSL 23.68□□□□□ -1.822e-7■■■■□ 25.3
RPS3P23396 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.822e-7■■■■□ 25.3
RPS3P23396 PPA2-219ENST00000513605 982 ntTSL 23.4□□□□□ -1.877e-7■■■■□ 25.3
RPS3P23396 METTL5-211ENST00000537825 464 ntTSL 33.28□□□□□ -1.887e-7■■■■□ 25.3
RPS3P23396 MORF4L1-207ENST00000558539 595 ntTSL 53.18□□□□□ -1.97e-7■■■■□ 25.3
RPS3P23396 PA2G4-202ENST00000550166 520 ntTSL 32.89□□□□□ -1.954e-10■■■■□ 25.3
RPS3P23396 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.967e-7■■■■□ 25.3
RPS3P23396 SYNJ2BP-COX16-201ENST00000555276 318 ntTSL 22.82□□□□□ -1.967e-7■■■■□ 25.3
RPS3P23396 PPA2-211ENST00000503171 585 ntTSL 42.78□□□□□ -1.967e-7■■■■□ 25.3
RPS3P23396 PPA2-222ENST00000515567 368 ntTSL 52.43□□□□□ -2.027e-7■■■■□ 25.3
RPS3P23396 RPP30-205ENST00000466462 643 ntTSL 32.2□□□□□ -2.069e-10■■■■□ 25.3
RPS3P23396 CPSF3-205ENST00000489629 547 ntTSL 30.51□□□□□ -2.337e-7■■■■□ 25.3
Retrieved 100 of 24,271 protein–RNA pairs in 26.8 ms