Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL1P22362 AC004854.2-201ENST00000608450 1441 ntBASIC17.69■□□□□ 0.42
CCL1P22362 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CCL1P22362 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCL1P22362 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCL1P22362 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CCL1P22362 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.68■□□□□ 0.42
CCL1P22362 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.68■□□□□ 0.42
CCL1P22362 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL1P22362 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL1P22362 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL1P22362 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL1P22362 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL1P22362 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCL1P22362 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL1P22362 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL1P22362 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL1P22362 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.67■□□□□ 0.42
CCL1P22362 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.67■□□□□ 0.42
CCL1P22362 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL1P22362 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL1P22362 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL1P22362 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL1P22362 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCL1P22362 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.66■□□□□ 0.42
CCL1P22362 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.66■□□□□ 0.42
CCL1P22362 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCL1P22362 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL1P22362 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.66■□□□□ 0.42
CCL1P22362 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCL1P22362 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCL1P22362 AC019069.1-201ENST00000610008 1333 ntBASIC17.66■□□□□ 0.42
CCL1P22362 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL1P22362 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL1P22362 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCL1P22362 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 AC007322.3-201ENST00000426526 701 ntBASIC17.65■□□□□ 0.42
CCL1P22362 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL1P22362 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCL1P22362 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.65■□□□□ 0.42
CCL1P22362 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL1P22362 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL1P22362 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCL1P22362 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCL1P22362 KRT8P36-201ENST00000489121 1440 ntBASIC17.64■□□□□ 0.42
CCL1P22362 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCL1P22362 AL391422.3-201ENST00000603791 2761 ntBASIC17.64■□□□□ 0.41
CCL1P22362 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL1P22362 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCL1P22362 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL1P22362 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCL1P22362 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.64■□□□□ 0.41
CCL1P22362 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCL1P22362 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.64■□□□□ 0.41
CCL1P22362 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL1P22362 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms