Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.59■□□□□ 0.57
CD53P19397 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CD53P19397 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.59■□□□□ 0.57
CD53P19397 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.59■□□□□ 0.57
CD53P19397 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.59■□□□□ 0.57
CD53P19397 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD53P19397 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD53P19397 AC003102.1-202ENST00000563394 1796 ntBASIC18.59■□□□□ 0.57
CD53P19397 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.59■□□□□ 0.57
CD53P19397 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CD53P19397 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CD53P19397 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CD53P19397 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD53P19397 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CD53P19397 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.58■□□□□ 0.56
CD53P19397 MFSD11-216ENST00000590393 1141 ntBASIC18.58■□□□□ 0.56
CD53P19397 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.58■□□□□ 0.56
CD53P19397 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CD53P19397 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD53P19397 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.58■□□□□ 0.56
CD53P19397 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CD53P19397 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CD53P19397 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.57■□□□□ 0.56
CD53P19397 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.57■□□□□ 0.56
CD53P19397 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CD53P19397 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.57■□□□□ 0.56
CD53P19397 AL121832.2-201ENST00000610979 668 ntBASIC18.57■□□□□ 0.56
CD53P19397 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD53P19397 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.57■□□□□ 0.56
CD53P19397 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CD53P19397 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.56■□□□□ 0.56
CD53P19397 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CD53P19397 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CD53P19397 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.56■□□□□ 0.56
CD53P19397 AC073314.1-201ENST00000568729 2216 ntBASIC18.56■□□□□ 0.56
CD53P19397 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CD53P19397 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.56■□□□□ 0.56
CD53P19397 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CD53P19397 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD53P19397 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD53P19397 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CD53P19397 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD53P19397 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CD53P19397 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CD53P19397 AC007952.6-201ENST00000573168 2673 ntBASIC18.55■□□□□ 0.56
CD53P19397 AC003957.1-201ENST00000625108 2673 ntBASIC18.55■□□□□ 0.56
CD53P19397 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 TSPY20P-201ENST00000450910 630 ntBASIC18.55■□□□□ 0.56
CD53P19397 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.55■□□□□ 0.56
CD53P19397 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.55■□□□□ 0.56
CD53P19397 AL050303.2-201ENST00000619798 666 ntBASIC18.55■□□□□ 0.56
CD53P19397 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.55■□□□□ 0.56
CD53P19397 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD53P19397 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.55■□□□□ 0.56
CD53P19397 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.54■□□□□ 0.56
CD53P19397 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.54■□□□□ 0.56
CD53P19397 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 AC083906.2-201ENST00000511578 360 ntBASIC18.54■□□□□ 0.56
CD53P19397 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD53P19397 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms