Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
XRCC1P18887 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 GPX1P1-201ENST00000388829 606 ntBASIC20.42■□□□□ 0.86
XRCC1P18887 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 AC104771.1-201ENST00000603335 964 ntBASIC20.42■□□□□ 0.86
XRCC1P18887 AL121832.2-201ENST00000610979 668 ntBASIC20.42■□□□□ 0.86
XRCC1P18887 AC243732.1-201ENST00000612648 864 ntBASIC20.42■□□□□ 0.86
XRCC1P18887 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
XRCC1P18887 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.42■□□□□ 0.86
XRCC1P18887 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.42■□□□□ 0.86
XRCC1P18887 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
XRCC1P18887 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.42■□□□□ 0.86
XRCC1P18887 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
XRCC1P18887 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
XRCC1P18887 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
XRCC1P18887 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.41■□□□□ 0.86
XRCC1P18887 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
XRCC1P18887 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.41■□□□□ 0.86
XRCC1P18887 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 AL109923.1-201ENST00000618799 583 ntBASIC20.41■□□□□ 0.86
XRCC1P18887 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 AC068338.2-201ENST00000563278 1430 ntBASIC20.41■□□□□ 0.86
XRCC1P18887 RNF165-205ENST00000588679 2904 ntBASIC20.41■□□□□ 0.86
XRCC1P18887 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.41■□□□□ 0.86
XRCC1P18887 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
XRCC1P18887 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.41■□□□□ 0.86
XRCC1P18887 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.41■□□□□ 0.86
XRCC1P18887 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
XRCC1P18887 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
XRCC1P18887 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC1P18887 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC1P18887 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
XRCC1P18887 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC1P18887 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
XRCC1P18887 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.4■□□□□ 0.86
XRCC1P18887 AC083906.2-201ENST00000511578 360 ntBASIC20.4■□□□□ 0.86
XRCC1P18887 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.4■□□□□ 0.86
XRCC1P18887 RBM17P2-201ENST00000616397 1405 ntBASIC20.4■□□□□ 0.86
XRCC1P18887 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
XRCC1P18887 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
XRCC1P18887 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.39■□□□□ 0.86
XRCC1P18887 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
XRCC1P18887 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
XRCC1P18887 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.39■□□□□ 0.86
XRCC1P18887 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
XRCC1P18887 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 AC133552.2-202ENST00000575694 574 ntBASIC20.39■□□□□ 0.85
XRCC1P18887 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.39■□□□□ 0.85
XRCC1P18887 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
XRCC1P18887 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
XRCC1P18887 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 AC007952.6-201ENST00000573168 2673 ntBASIC20.39■□□□□ 0.85
XRCC1P18887 AC003957.1-201ENST00000625108 2673 ntBASIC20.39■□□□□ 0.85
XRCC1P18887 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.39■□□□□ 0.85
XRCC1P18887 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
XRCC1P18887 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
XRCC1P18887 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.38■□□□□ 0.85
XRCC1P18887 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC1P18887 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.38■□□□□ 0.85
XRCC1P18887 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
XRCC1P18887 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC1P18887 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
XRCC1P18887 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.38■□□□□ 0.85
XRCC1P18887 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.38■□□□□ 0.85
XRCC1P18887 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms