Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.13■□□□□ 0.97
ERCC2P18074 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC2P18074 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 CDCA4P2-201ENST00000441182 718 ntBASIC21.13■□□□□ 0.97
ERCC2P18074 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC2P18074 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC2P18074 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.13■□□□□ 0.97
ERCC2P18074 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC2P18074 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ERCC2P18074 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ERCC2P18074 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 AL157384.1-201ENST00000445995 2473 ntBASIC21.12■□□□□ 0.97
ERCC2P18074 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC2P18074 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC2P18074 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.11■□□□□ 0.97
ERCC2P18074 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ERCC2P18074 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ERCC2P18074 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.11■□□□□ 0.97
ERCC2P18074 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 MIR2861-201ENST00000636310 90 ntBASIC21.11■□□□□ 0.97
ERCC2P18074 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ERCC2P18074 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC2P18074 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
ERCC2P18074 AL121603.2-201ENST00000557373 2117 ntBASIC21.11■□□□□ 0.97
ERCC2P18074 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.11■□□□□ 0.97
ERCC2P18074 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.1■□□□□ 0.97
ERCC2P18074 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ERCC2P18074 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.1■□□□□ 0.97
ERCC2P18074 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ERCC2P18074 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 CYP2T1P-201ENST00000432607 1285 ntBASIC21.1■□□□□ 0.97
ERCC2P18074 RARRES2P4-201ENST00000514074 484 ntBASIC21.1■□□□□ 0.97
ERCC2P18074 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.1■□□□□ 0.97
ERCC2P18074 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.1■□□□□ 0.97
ERCC2P18074 RAP2CP1-201ENST00000605103 478 ntBASIC21.1■□□□□ 0.97
ERCC2P18074 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 FEM1AP1-201ENST00000431297 1995 ntBASIC21.1■□□□□ 0.97
ERCC2P18074 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC2P18074 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ERCC2P18074 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ERCC2P18074 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.09■□□□□ 0.97
ERCC2P18074 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.09■□□□□ 0.97
ERCC2P18074 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ERCC2P18074 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ERCC2P18074 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ERCC2P18074 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms