Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL4P13236 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL4P13236 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.46■□□□□ 0.71
CCL4P13236 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.46■□□□□ 0.71
CCL4P13236 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL4P13236 SNORA78-201ENST00000459373 127 ntBASIC19.46■□□□□ 0.71
CCL4P13236 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.46■□□□□ 0.71
CCL4P13236 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 AC006557.6-201ENST00000623071 864 ntBASIC19.46■□□□□ 0.71
CCL4P13236 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCL4P13236 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.46■□□□□ 0.71
CCL4P13236 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCL4P13236 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL4P13236 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL4P13236 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCL4P13236 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL4P13236 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL4P13236 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.45■□□□□ 0.7
CCL4P13236 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL4P13236 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL4P13236 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL4P13236 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CCL4P13236 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL4P13236 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 MTDHP1-201ENST00000605323 784 ntBASIC19.44■□□□□ 0.7
CCL4P13236 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 AC120498.8-201ENST00000614275 531 ntBASIC19.44■□□□□ 0.7
CCL4P13236 AL356652.1-201ENST00000615962 565 ntBASIC19.44■□□□□ 0.7
CCL4P13236 AL023875.1-201ENST00000640777 796 ntBASIC19.44■□□□□ 0.7
CCL4P13236 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.44■□□□□ 0.7
CCL4P13236 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCL4P13236 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL4P13236 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL4P13236 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCL4P13236 PGM5P4-201ENST00000421970 445 ntBASIC19.43■□□□□ 0.7
CCL4P13236 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCL4P13236 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.43■□□□□ 0.7
CCL4P13236 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL4P13236 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.43■□□□□ 0.7
CCL4P13236 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCL4P13236 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL4P13236 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL4P13236 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL4P13236 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL4P13236 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL4P13236 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.42■□□□□ 0.7
CCL4P13236 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms