Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 RNF165-205ENST00000588679 2904 ntBASIC18.65■□□□□ 0.58
HIST1H2ABP04908 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2ABP04908 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2ABP04908 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2ABP04908 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2ABP04908 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 KRT18P20-201ENST00000548986 1279 ntBASIC18.64■□□□□ 0.57
HIST1H2ABP04908 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 LINC01521-201ENST00000504184 1943 ntBASIC18.64■□□□□ 0.57
HIST1H2ABP04908 FEM1AP1-201ENST00000431297 1995 ntBASIC18.64■□□□□ 0.57
HIST1H2ABP04908 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2ABP04908 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 AL157384.1-201ENST00000445995 2473 ntBASIC18.63■□□□□ 0.57
HIST1H2ABP04908 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HIST1H2ABP04908 AC007225.1-201ENST00000566331 1836 ntBASIC18.63■□□□□ 0.57
HIST1H2ABP04908 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 SLC7A5P2-201ENST00000553010 536 ntBASIC18.62■□□□□ 0.57
HIST1H2ABP04908 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST1H2ABP04908 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 KRT19P1-201ENST00000405746 1186 ntBASIC18.61■□□□□ 0.57
HIST1H2ABP04908 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2ABP04908 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms