Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GAPDHP04406 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAPDHP04406 AC087289.5-201ENST00000586076 3175 ntBASIC17.12■□□□□ 0.33
GAPDHP04406 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.11■□□□□ 0.33
GAPDHP04406 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GAPDHP04406 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.11■□□□□ 0.33
GAPDHP04406 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.11■□□□□ 0.33
GAPDHP04406 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.11■□□□□ 0.33
GAPDHP04406 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.11■□□□□ 0.33
GAPDHP04406 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.11■□□□□ 0.33
GAPDHP04406 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.11■□□□□ 0.33
GAPDHP04406 TERF1P2-201ENST00000583350 1212 ntBASIC17.11■□□□□ 0.33
GAPDHP04406 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.11■□□□□ 0.33
GAPDHP04406 AC053503.5-201ENST00000601508 636 ntBASIC17.11■□□□□ 0.33
GAPDHP04406 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GAPDHP04406 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.11■□□□□ 0.33
GAPDHP04406 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 KRT87P-202ENST00000534226 1464 ntBASIC17.11■□□□□ 0.33
GAPDHP04406 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAPDHP04406 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
GAPDHP04406 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 AC006128.1-201ENST00000624704 1661 ntBASIC17.1■□□□□ 0.33
GAPDHP04406 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.1■□□□□ 0.33
GAPDHP04406 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GAPDHP04406 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.1■□□□□ 0.33
GAPDHP04406 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
GAPDHP04406 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.1■□□□□ 0.33
GAPDHP04406 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.1■□□□□ 0.33
GAPDHP04406 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.1■□□□□ 0.33
GAPDHP04406 CCDC92B-201ENST00000575506 885 ntBASIC17.1■□□□□ 0.33
GAPDHP04406 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
GAPDHP04406 SMG8-203ENST00000578922 2178 ntBASIC17.1■□□□□ 0.33
GAPDHP04406 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GAPDHP04406 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
GAPDHP04406 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GAPDHP04406 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.1■□□□□ 0.33
GAPDHP04406 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAPDHP04406 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GAPDHP04406 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.09■□□□□ 0.33
GAPDHP04406 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.09■□□□□ 0.33
GAPDHP04406 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.09■□□□□ 0.33
GAPDHP04406 KRT18P14-201ENST00000534205 1250 ntBASIC17.09■□□□□ 0.33
GAPDHP04406 EEF1DP3-203ENST00000566025 782 ntBASIC17.09■□□□□ 0.33
GAPDHP04406 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.09■□□□□ 0.33
GAPDHP04406 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.09■□□□□ 0.33
GAPDHP04406 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.09■□□□□ 0.33
GAPDHP04406 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAPDHP04406 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
GAPDHP04406 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GAPDHP04406 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAPDHP04406 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAPDHP04406 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAPDHP04406 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms